GLYMA20G33430 (Glycine max)
NAC/NAM

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF02365 (NAM) IPR003441 GLYMA20G33430 T293178_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ANAC050
M07200_2.00 		Arabidopsis thaliana
CTTGHNNYNCAAGNA
TNCTTGNRNNDCAAG		 Dap-seq
OMalley et al.(2016)
ANAC050_colamp_a 		0.917 0.825
ANAC050
M07201_2.00 		Arabidopsis thaliana
CTTGNNNHRCAMGBHA
TDVCKTGYDNNNCAAG		 Dap-seq
OMalley et al.(2016)
ANAC050_col_v3a 		0.917 0.825
For this family, TFs with SR scores > 0.870 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
GLYMA20G33430.1 NAC/NAM 35 161
GLYMA20G33430.2 NAC/NAM 35 161

Links

Other NAC/NAM family TFs
Other Glycine max TFs

92 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
AMTR_s00057p00091350 Amborella trichopoda AMTR_s00057p00091350 I 0.000
Bo9g108730 Brassica oleracea Bo9g108730 N 0.000
Bra003088 Brassica rapa Bra003088 N 0.000
evm.TU.supercontig_3.98 Carica papaya evm.TU.supercontig_3.98 N 0.000
Cla004331 Citrullus lanatus Cla004331 N 0.000
gene12898-v1.0-hybrid Fragaria vesca gene12898-v1.0-hybrid N 0.000
GLYMA06G13530 Glycine max GLYMA06G13530 N 0.000
Gorai.003G121600 Gossypium raimondii Gorai.003G121600 N 0.000
MLOC_12609 Hordeum vulgare MLOC_12609 I 0.000
Lus10005921.g Linum usitatissimum Lus10005921.g N 0.000
LjSGA_030914.1 Lotus japonicus LjSGA_030914.1 N 0.000
chr1.CM0033.320.nc Lotus japonicus chr1.CM0033.320.nc N 0.000
MDP0000819497 Malus domestica MDP0000819497 N 0.000
MDP0000141137 Malus domestica MDP0000141137 N 0.000
cassava34339.m1 Manihot esculenta cassava34339.m1 N 0.000
cassava39076.m1 Manihot esculenta cassava39076.m1 N 0.000
mgf025545m Mimulus guttatus mgf025545m N 0.000
GSMUA_AchrUn_randomG11290_001 Musa acuminata GSMUA_AchrUn_randomG11290_001 N 0.000
Pavir.Ab02992 Panicum virgatum Pavir.Ab02992 I 0.000
POPTR_0015s01410 Populus trichocarpa POPTR_0015s01410 N 0.000
POPTR_0012s02390 Populus trichocarpa POPTR_0012s02390 N 0.000
Pm019768 Prunus mume Pm019768 N 0.000
PRUPE_ppa015130mg Prunus persica PRUPE_ppa015130mg N 0.000
30024.m001687 Ricinus communis 30024.m001687 N 0.000
30138.m004071 Ricinus communis 30138.m004071 I 0.000
SapurV1A.0250s0360 Salix purpurea SapurV1A.0250s0360 N 0.000
Si020172m.g Setaria italica Si020172m.g I 0.000
Solyc03g083040.1 Solanum lycopersicum Solyc03g083040.1 N 0.000
PGSC0003DMG400018531 Solanum tuberosum PGSC0003DMG400018531 N 0.000
TCM_015430 Theobroma cacao TCM_015430 N 0.000
TRIUR3_19503 Triticum urartu TRIUR3_19503 I 0.000
VIT_16s0098g01730 Vitis vinifera VIT_16s0098g01730 N 0.000