CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Sb04g024780
(
Sorghum bicolor
)
NAC/NAM
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF02365 (NAM)
IPR003441
Sb04g024780
T295541_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Sb04g024780.1
NAC/NAM
58
201
PAGVKFDPSELELLQHLEQKVGLGGSRPHVLIDEFIPTIDNDEGICYSHPENLPGIKTDGSNAHFFHRVSNAYGCGLRKRRRIINCNNHTVPDEHVRWHKTGRSKAICDNGVIKGWRKIMVLYKASQRGGKPDRANWVMHQYHL
Links
Other
NAC/NAM
family TFs
Other
Sorghum bicolor
TFs
88 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
F775_00415
Aegilops tauschii
F775_00415
N
0.920
F775_14938
Aegilops tauschii
F775_14938
N
0.930
F775_30638
Aegilops tauschii
F775_30638
I
0.965
AMTR_s00049p00217400
Amborella trichopoda
AMTR_s00049p00217400
I
0.920
Aquca_054_00006
Aquilegia coerulea
Aquca_054_00006
I
0.933
BRADI3G47627
Brachypodium distachyon
BRADI3G47627
I
0.971
BRADI5G13450
Brachypodium distachyon
BRADI5G13450
N
0.927
Ca_23230
Cicer arietinum
Ca_23230
N
0.905
Ciclev10015507m.g
Citrus clementina
Ciclev10015507m.g
I
0.921
Cucsa.011210
Cucumis sativus
Cucsa.011210
I
0.876
Eucgr.D00594
Eucalyptus grandis
Eucgr.D00594
I
0.881
Eucgr.J02254
Eucalyptus grandis
Eucgr.J02254
I
0.896
gene27940-v1.0-hybrid
Fragaria vesca
gene27940-v1.0-hybrid
I
0.929
GLYMA05G09110
Glycine max
GLYMA05G09110
I
0.927
GLYMA20G32690
Glycine max
GLYMA20G32690
I
0.894
GLYMA19G08510
Glycine max
GLYMA19G08510
N
0.919
GLYMA19G00640
Glycine max
GLYMA19G00640
N
0.941
GLYMA16G07501
Glycine max
GLYMA16G07501
N
0.911
GLYMA01G22510
Glycine max
GLYMA01G22510
I
0.873
Gorai.007G075300
Gossypium raimondii
Gorai.007G075300
I
0.920
LPERR02G18380
Leersia perrieri
LPERR02G18380
N
0.977
Lus10039873.g
Linum usitatissimum
Lus10039873.g
I
0.878
Lus10018637.g
Linum usitatissimum
Lus10018637.g
I
0.878
chr1.CM0001.370.nd
Lotus japonicus
chr1.CM0001.370.nd
N
0.887
MDP0000663564
Malus domestica
MDP0000663564
I
0.905
cassava3690.m1
Manihot esculenta
cassava3690.m1
I
0.892
MTR_7g033320
Medicago truncatula
MTR_7g033320
I
0.874
mgf018486m
Mimulus guttatus
mgf018486m
I
0.932
GSMUA_AchrUn_randomG17050_001
Musa acuminata
GSMUA_AchrUn_randomG17050_001
I
0.930
GSMUA_Achr9G01880_001
Musa acuminata
GSMUA_Achr9G01880_001
I
0.930
GSMUA_Achr3G07330_001
Musa acuminata
GSMUA_Achr3G07330_001
I
0.891
OBART04G16110
Oryza barthii
OBART04G16110
N
0.921
OBART02G22660
Oryza barthii
OBART02G22660
N
0.977
OB02G30060
Oryza brachyantha
OB02G30060
N
0.977
ORGLA02G0193300
Oryza glaberrima
ORGLA02G0193300
N
0.977
OGLUM02G22980
Oryza glumaepatula
OGLUM02G22980
N
0.977
OGLUM04G16020
Oryza glumaepatula
OGLUM04G16020
N
0.921
BGIOSGA006133
Oryza indica
BGIOSGA006133
N
0.977
BGIOSGA014881
Oryza indica
BGIOSGA014881
N
0.921
OLONG_005904
Oryza longistaminata
OLONG_005904
N
0.921
OLONG_021085
Oryza longistaminata
OLONG_021085
I
0.876
OLONG_021848
Oryza longistaminata
OLONG_021848
N
0.976
OMERI01G02010
Oryza meridionalis
OMERI01G02010
N
0.921
OMERI02G22200
Oryza meridionalis
OMERI02G22200
N
0.977
ONIVA02G25300
Oryza nivara
ONIVA02G25300
N
0.977
ONIVA04G14230
Oryza nivara
ONIVA04G14230
N
0.921
OPUNC02G20570
Oryza punctata
OPUNC02G20570
N
0.977
OPUNC04G13980
Oryza punctata
OPUNC04G13980
N
0.927
ORUFI05G06530
Oryza rufipogon
ORUFI05G06530
I
0.876
ORUFI02G23890
Oryza rufipogon
ORUFI02G23890
N
0.977
ORUFI04G17470
Oryza rufipogon
ORUFI04G17470
N
0.921
OS02G0594800
Oryza sativa
OS02G0594800
N
0.977
Pavir.Aa00442
Panicum virgatum
Pavir.Aa00442
I
0.889
Pavir.Aa01341
Panicum virgatum
Pavir.Aa01341
I
0.959
Pavir.Ab02181
Panicum virgatum
Pavir.Ab02181
I
0.962
Pavir.Ab02919
Panicum virgatum
Pavir.Ab02919
I
0.915
Pavir.Ga01597
Panicum virgatum
Pavir.Ga01597
I
0.917
Pavir.Ga02302
Panicum virgatum
Pavir.Ga02302
I
0.871
Pavir.Gb01338
Panicum virgatum
Pavir.Gb01338
I
0.917
PDK_20s1381351g001
Phoenix dactylifera
PDK_20s1381351g001
I
0.946
POPTR_0001s35490
Populus trichocarpa
POPTR_0001s35490
I
0.909
POPTR_0010s13980
Populus trichocarpa
POPTR_0010s13980
I
0.879
POPTR_0007s01350
Populus trichocarpa
POPTR_0007s01350
I
0.907
Pm015625
Prunus mume
Pm015625
I
0.899
PRUPE_ppa006948mg
Prunus persica
PRUPE_ppa006948mg
I
0.877
29917.m002016
Ricinus communis
29917.m002016
I
0.879
SapurV1A.2554s0030
Salix purpurea
SapurV1A.2554s0030
I
0.871
SapurV1A.1828s0030
Salix purpurea
SapurV1A.1828s0030
I
0.871
SapurV1A.1388s0020
Salix purpurea
SapurV1A.1388s0020
I
0.928
SapurV1A.0716s0010
Salix purpurea
SapurV1A.0716s0010
I
0.928
SapurV1A.3101s0030
Salix purpurea
SapurV1A.3101s0030
I
0.871
Si019444m.g
Setaria italica
Si019444m.g
I
0.889
Si017393m.g
Setaria italica
Si017393m.g
I
0.977
Si012740m.g
Setaria italica
Si012740m.g
N
0.935
Solyc02g093420.2
Solanum lycopersicum
Solyc02g093420.2
I
0.875
PGSC0003DMG400012607
Solanum tuberosum
PGSC0003DMG400012607
I
0.889
Sb06g020103
Sorghum bicolor
Sb06g020103
I
0.928
TCM_016984
Theobroma cacao
TCM_016984
I
0.899
Traes_2DL_3757D78B3
Triticum aestivum
Traes_2DL_3757D78B3
N
0.920
Traes_2DL_AE270CBAA1
Triticum aestivum
Traes_2DL_AE270CBAA1
N
0.920
Traes_2DL_AE270CBAA
Triticum aestivum
Traes_2DL_AE270CBAA
N
0.920
Traes_6AL_C14335DC8
Triticum aestivum
Traes_6AL_C14335DC8
I
0.947
Traes_6BL_B27806C89
Triticum aestivum
Traes_6BL_B27806C89
I
0.965
Traes_6DL_2F3586557
Triticum aestivum
Traes_6DL_2F3586557
I
0.965
VIT_14s0066g00360
Vitis vinifera
VIT_14s0066g00360
I
0.920
GRMZM2G450445
Zea mays
GRMZM2G450445
N
0.899
GRMZM2G104078
Zea mays
GRMZM2G104078
N
0.990
GRMZM2G038073
Zea mays
GRMZM2G038073
N
0.990