CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Solyc01g009860.2
(
Solanum lycopersicum
)
NAC/NAM
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF02365 (NAM)
IPR003441
Solyc01g009860.2
T295810_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Solyc01g009860.2.1
NAC/NAM
15
141
PPGFRFRPTDEELVVQYLKRKVFSFPLPASIIPEVEVYKSDPWDLPGDMEQEKYFFSTKEVKYPNGNRSNRATNSGYWKATGIDKQIILRGRQQQQQLIGLKKTLVFYRGKSPHGCRTNWIMHEYRL
Links
Other
NAC/NAM
family TFs
Other
Solanum lycopersicum
TFs
24 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
nAv.1.0.1.g07732
Acanthocheilonema viteae
nAv.1.0.1.g07732
I
ACYPI003867
Acyrthosiphon pisum
ACYPI003867
I
ENSAMEG00000000494
Ailuropoda melanoleuca
ENSAMEG00000000494
I
ENSAMEG00000009393
Ailuropoda melanoleuca
ENSAMEG00000009393
I
ENSAMEG00000016564
Ailuropoda melanoleuca
ENSAMEG00000016564
I
ENSAMEG00000018423
Ailuropoda melanoleuca
ENSAMEG00000018423
I
Alligator_sinensis_CCG005029.1
Alligator sinensis
Alligator_sinensis_CCG005029.1
I
ENSAPLG00000003147
Anas platyrhynchos
ENSAPLG00000003147
I
ENSAPLG00000004899
Anas platyrhynchos
ENSAPLG00000004899
I
ACAC_0000909201
Angiostrongylus cantonensis
ACAC_0000909201
I
ACOC_0000576201
Angiostrongylus costaricensis
ACOC_0000576201
I
AALB005039
Anopheles albimanus
AALB005039
I
AARA007412
Anopheles arabiensis
AARA007412
I
ACHR003797
Anopheles christyi
ACHR003797
I
ACOM024661
Anopheles coluzzii
ACOM024661
I
ACUA007180
Anopheles culicifacies
ACUA007180
I
AEPI000589
Anopheles epiroticus
AEPI000589
I
AFUN005441
Anopheles funestus
AFUN005441
I
AGAP006108
Anopheles gambiae
AGAP006108
I
AMEC011905
Anopheles melas
AMEC011905
I
AMEM010049
Anopheles merus
AMEM010049
I
AMIN009954
Anopheles minimus
AMIN009954
I
AQUA011660
Anopheles quadriannulatus
AQUA011660
I
ASTEI02878
Anopheles stephensi
ASTEI02878
I
GB54355
Apis mellifera
GB54355
I
Afo_R006672
Aptenodytes forsteri
Afo_R006672
I
Afo_R014263
Aptenodytes forsteri
Afo_R014263
I
ENSAMXG00000007090
Astyanax mexicanus
ENSAMXG00000007090
I
ENSAMXG00000014478
Astyanax mexicanus
ENSAMXG00000014478
I
BGLB002206
Biomphalaria glabrata
BGLB002206
I
BGIBMGA000526
Bombyx mori
BGIBMGA000526
I
ENSBTAP00000012735-D1
Bos grunniens
ENSBTAP00000012735-D1
I
ENSP00000007699-D1
Bos grunniens
ENSP00000007699-D1
I
YBX2
Bos taurus
ENSBTAG00000009126
I
YBX3
Bos taurus
ENSBTAG00000009663
I
YBX1
Bos taurus
ENSBTAG00000017368
I
e_gw.440.24.1
Branchiostoma floridae
e_gw.440.24.1
I
fgenesh2_pg.scaffold_14000192
Branchiostoma floridae
fgenesh2_pg.scaffold_14000192
I
Bm3781
Brugia malayi
Bm3781
I
Brh_R007443
Buceros rhinoceros
Brh_R007443
I
Brh_R010004
Buceros rhinoceros
Brh_R010004
I
cey-1
Caenorhabditis elegans
WBGene00000472
D
CJA05984
Caenorhabditis japonica
CJA05984
I
ENSCJAG00000003155
Callithrix jacchus
ENSCJAG00000003155
I
ENSCJAG00000007407
Callithrix jacchus
ENSCJAG00000007407
I
ENSCJAG00000010572
Callithrix jacchus
ENSCJAG00000010572
I
YBX2
Callithrix jacchus
ENSCJAG00000016581
I
ENSCJAG00000018832
Callithrix jacchus
ENSCJAG00000018832
I
ENSCJAG00000021660
Callithrix jacchus
ENSCJAG00000021660
I
ENSCJAG00000031567
Callithrix jacchus
ENSCJAG00000031567
I
ENSCJAG00000031891
Callithrix jacchus
ENSCJAG00000031891
I
ENSCJAG00000032211
Callithrix jacchus
ENSCJAG00000032211
I
ENSCJAG00000033824
Callithrix jacchus
ENSCJAG00000033824
I
ENSCJAG00000035120
Callithrix jacchus
ENSCJAG00000035120
I
ENSCJAG00000035469
Callithrix jacchus
ENSCJAG00000035469
I
Aan_R001440
Calypte anna
Aan_R001440
I
Aan_R014295
Calypte anna
Aan_R014295
I
YBX1
Canis familiaris
ENSCAFG00000002541
I
ENSCAFG00000005162
Canis familiaris
ENSCAFG00000005162
I
ENSCAFG00000005471
Canis familiaris
ENSCAFG00000005471
I
YBX3
Canis familiaris
ENSCAFG00000013401
I
ENSCAFG00000016128
Canis familiaris
ENSCAFG00000016128
I
ENSCAFG00000016520
Canis familiaris
ENSCAFG00000016520
I
ENSCAFG00000016523
Canis familiaris
ENSCAFG00000016523
I
ENSCAFG00000017286
Canis familiaris
ENSCAFG00000017286
I
ENSCAFG00000030502
Canis familiaris
ENSCAFG00000030502
I
CapteG166603
Capitella teleta
CapteG166603
I
CapteG201202
Capitella teleta
CapteG201202
I
CapteG48958
Capitella teleta
CapteG48958
I
CapteG50376
Capitella teleta
CapteG50376
I
CapteG58124
Capitella teleta
CapteG58124
I
YBX2
Cavia porcellus
ENSCPOG00000009543
I
YBX1
Cavia porcellus
ENSCPOG00000010888
I
YBX3
Cavia porcellus
ENSCPOG00000011329
I
Cmyd_10003103
Chelonia mydas
Cmyd_10003103
I
ENSCSAG00000001168
Chlorocebus sabaeus
ENSCSAG00000001168
I
ENSCSAG00000008744
Chlorocebus sabaeus
ENSCSAG00000008744
I
ENSCSAG00000011857
Chlorocebus sabaeus
ENSCSAG00000011857
I
YBX3
Choloepus hoffmanni
ENSCHOG00000011988
I
CLEC013417
Cimex lectularius
CLEC013417
I
ENSCSAVG00000003053
Ciona savignyi
ENSCSAVG00000003053
I
CGI_10014112
Crassostrea gigas
CGI_10014112
I
KGM_01291
Danaus plexippus
KGM_01291
I
ybx1
Danio rerio
ENSDARG00000004757
I
DAPPUDRAFT_311200
Daphnia pulex
DAPPUDRAFT_311200
I
YBX2
Dasypus novemcinctus
ENSDNOG00000013746
I
YBX1
Dasypus novemcinctus
ENSDNOG00000036760
I
ENSDNOG00000040947
Dasypus novemcinctus
ENSDNOG00000040947
I
ENSDNOG00000043057
Dasypus novemcinctus
ENSDNOG00000043057
I
ENSDNOG00000046107
Dasypus novemcinctus
ENSDNOG00000046107
N
ENSDNOG00000049716
Dasypus novemcinctus
ENSDNOG00000049716
I
YQE_07192
Dendroctonus ponderosae
YQE_07192
I
DICVIV_10680
Dictyocaulus viviparus
DICVIV_10680
I
Ybx3
Dipodomys ordii
ENSDORG00000009103
I
Ybx2
Dipodomys ordii
ENSDORG00000010882
I
nDi.2.2.2.g07679
Dirofilaria immitis
nDi.2.2.2.g07679
I
GF10852
Drosophila ananassae
FBgn0087892
I
GH16919
Drosophila grimshawi
FBgn0124390
I
yps
Drosophila melanogaster
FBgn0022959
I
GI13673
Drosophila mojavensis
FBgn0136428
I
GL15684
Drosophila persimilis
FBgn0153288
I
GA23502
Drosophila pseudoobscura
FBgn0244903
I
GM24682
Drosophila sechellia
FBgn0179545
I
GD12750
Drosophila simulans
FBgn0184477
I
GJ14010
Drosophila virilis
FBgn0201228
I
GK16710
Drosophila willistoni
FBgn0218712
I
GE20150
Drosophila yakuba
FBgn0237472
I
YBX3
Echinops telfairi
ENSETEG00000002557
I
YBX2
Echinops telfairi
ENSETEG00000014271
I
EEL_0000726801
Elaeophora elaphi
EEL_0000726801
I
ENSECAG00000008961
Equus caballus
ENSECAG00000008961
I
YBX2
Equus caballus
ENSECAG00000009996
I
ENSECAG00000011356
Equus caballus
ENSECAG00000011356
I
YBX3
Equus caballus
ENSECAG00000013777
I
ENSECAG00000023592
Equus caballus
ENSECAG00000023592
I
YBX1
Erinaceus europaeus
ENSEEUG00000005657
I
ENSEEUG00000007494
Erinaceus europaeus
ENSEEUG00000007494
I
YBX3
Erinaceus europaeus
ENSEEUG00000010415
I
YBX2
Felis catus
ENSFCAG00000018097
I
ENSFCAG00000022604
Felis catus
ENSFCAG00000022604
I
YBX3
Felis catus
ENSFCAG00000027748
I
ENSFALG00000003661
Ficedula albicollis
ENSFALG00000003661
I
ENSFALG00000010305
Ficedula albicollis
ENSFALG00000010305
I
ENSGMOG00000007765
Gadus morhua
ENSGMOG00000007765
I
ENSGMOG00000015216
Gadus morhua
ENSGMOG00000015216
I
YBX1
Gallus gallus
ENSGALG00000004848
I
ENSGALG00000018512
Gallus gallus
ENSGALG00000018512
I
ybx1
Gasterosteus aculeatus
ENSGACG00000006447
I
YBX2
Gasterosteus aculeatus
ENSGACG00000019392
I
Gfo_R007354
Geospiza fortis
Gfo_R007354
I
Gfo_R009480
Geospiza fortis
Gfo_R009480
I
GPUH_0001124501
Gongylonema pulchrum
GPUH_0001124501
I
YBX3
Gorilla gorilla
ENSGGOG00000001352
I
ENSGGOG00000004758
Gorilla gorilla
ENSGGOG00000004758
I
YBX2
Gorilla gorilla
ENSGGOG00000007399
I
ENSGGOG00000023581
Gorilla gorilla
ENSGGOG00000023581
I
HMEL008461
Heliconius melpomene
HMEL008461
I
HPBE_0000695301
Heligmosomoides bakeri
HPBE_0000695301
I
YBX2
Homo sapiens
ENSG00000006047
I
YBX3
Homo sapiens
ENSG00000060138
I
YBX1
Homo sapiens
ENSG00000065978
D
XP_002154000.1
Hydra magnipapillata
XP_002154000.1
I
XP_002159745.1
Hydra magnipapillata
XP_002159745.1
I
ENSSTOG00000000116
Ictidomys tridecemlineatus
ENSSTOG00000000116
I
ENSSTOG00000002108
Ictidomys tridecemlineatus
ENSSTOG00000002108
I
ENSSTOG00000008630
Ictidomys tridecemlineatus
ENSSTOG00000008630
I
ENSSTOG00000022212
Ictidomys tridecemlineatus
ENSSTOG00000022212
I
ENSSTOG00000026413
Ictidomys tridecemlineatus
ENSSTOG00000026413
I
ENSSTOG00000027979
Ictidomys tridecemlineatus
ENSSTOG00000027979
I
ISCW005281
Ixodes scapularis
ISCW005281
I
ISCW022953
Ixodes scapularis
ISCW022953
N
ENSLACG00000018135
Latimeria chalumnae
ENSLACG00000018135
I
ENSLOCG00000002530
Lepisosteus oculatus
ENSLOCG00000002530
I
ENSLOCG00000013819
Lepisosteus oculatus
ENSLOCG00000013819
I
LDEC002142
Leptinotarsa decemlineata
LDEC002142
I
nLs.2.1.2.g03745
Litomosoides sigmodontis
nLs.2.1.2.g03745
I
LOAG_17966
Loa loa
LOAG_17966
I
LotgiG78612
Lottia gigantea
LotgiG78612
I
ENSLAFG00000007597
Loxodonta africana
ENSLAFG00000007597
I
YBX2
Loxodonta africana
ENSLAFG00000014006
I
YBX3
Loxodonta africana
ENSLAFG00000017247
I
ENSMMUP00000017257
Macaca fascicularis
ENSMMUP00000017257
I
ENSP00000228251
Macaca fascicularis
ENSP00000228251
I
ENSMMUG00000013136
Macaca mulatta
ENSMMUG00000013136
I
YBX3
Macaca mulatta
ENSMMUG00000022469
I
ENSMMUG00000022712
Macaca mulatta
ENSMMUG00000022712
I
ENSMMUG00000032563
Macaca mulatta
ENSMMUG00000032563
I
ENSMEUG00000009893
Macropus eugenii
ENSMEUG00000009893
I
YBX1
Meleagris gallopavo
ENSMGAG00000006879
I
YBX3
Meleagris gallopavo
ENSMGAG00000014224
I
MCINX006244
Melitaea cinxia
MCINX006244
I
genemark-nMf.1.1.scaf00296-processed-gene-0.4
Meloidogyne floridensis
genemark-nMf.1.1.scaf00296-processed-gene-0.4
I
MhA1_Contig2458.frz3.gene1
Meloidogyne hapla
MhA1_Contig2458.frz3.gene1
I
Minc12652
Meloidogyne incognita
Minc12652
I
ENSMICG00000004602
Microcebus murinus
ENSMICG00000004602
I
YBX2
Microcebus murinus
ENSMICG00000012453
I
ENSMICG00000014984
Microcebus murinus
ENSMICG00000014984
I
YBX1
Monodelphis domestica
ENSMODG00000017214
I
YBX2
Monodelphis domestica
ENSMODG00000017596
I
YBX3
Monodelphis domestica
ENSMODG00000018248
I
ENSMODG00000022963
Monodelphis domestica
ENSMODG00000022963
I
ENSMPUG00000011810
Mustela putorius furo
ENSMPUG00000011810
I
ENSMPUG00000013922
Mustela putorius furo
ENSMPUG00000013922
I
ENSMPUG00000018977
Mustela putorius furo
ENSMPUG00000018977
I
Ybx2
Mus musculus
ENSMUSG00000018554
I
Ybx1
Mus musculus
ENSMUSG00000028639
I
Ybx3
Mus musculus
ENSMUSG00000030189
I
Myotis_brandtii_YBX1_10016780
Myotis brandtii
Myotis_brandtii_YBX1_10016780
I
YBX3
Myotis lucifugus
ENSMLUG00000007476
I
ENSMLUG00000029452
Myotis lucifugus
ENSMLUG00000029452
I
NBR_0000795701
Nippostrongylus brasiliensis
NBR_0000795701
I
ENSNLEG00000008063
Nomascus leucogenys
ENSNLEG00000008063
I
ENSNLEG00000012324
Nomascus leucogenys
ENSNLEG00000012324
I
YBX2
Ochotona princeps
ENSOPRG00000013773
I
Ocbimv22002282m.g
Octopus bimaculoides
Ocbimv22002282m.g
I
nOo.2.0.1.g01690
Onchocerca ochengi
nOo.2.0.1.g01690
I
WBGene00247949
Onchocerca volvulus
WBGene00247949
I
Ogr02658
Ophisaurus gracilis
Ogr02658
I
Ogr10632
Ophisaurus gracilis
Ogr10632
I
T265_06248
Opisthorchis viverrini
T265_06248
I
ENSONIG00000002062
Oreochromis niloticus
ENSONIG00000002062
I
ENSONIG00000018954
Oreochromis niloticus
ENSONIG00000018954
I
ENSOANG00000001663
Ornithorhynchus anatinus
ENSOANG00000001663
I
YBX1
Ornithorhynchus anatinus
ENSOANG00000011725
I
ENSOANG00000013173
Ornithorhynchus anatinus
ENSOANG00000013173
I
YBX2
Oryctolagus cuniculus
ENSOCUG00000015064
I
ENSOCUG00000024588
Oryctolagus cuniculus
ENSOCUG00000024588
I
ENSOCUG00000028047
Oryctolagus cuniculus
ENSOCUG00000028047
I
ybx1
Oryzias latipes
ENSORLG00000004225
I
ENSORLG00000006269
Oryzias latipes
ENSORLG00000006269
I
ENSORLG00000018683
Oryzias latipes
ENSORLG00000018683
I
YBX2
Otolemur garnettii
ENSOGAG00000004392
I
YBX1
Otolemur garnettii
ENSOGAG00000006784
I
YBX3
Otolemur garnettii
ENSOGAG00000013245
I
ENSOGAG00000014939
Otolemur garnettii
ENSOGAG00000014939
I
ENSOGAG00000024681
Otolemur garnettii
ENSOGAG00000024681
I
ENSOGAG00000027853
Otolemur garnettii
ENSOGAG00000027853
I
ENSOGAG00000030360
Otolemur garnettii
ENSOGAG00000030360
I
ENSOGAG00000030653
Otolemur garnettii
ENSOGAG00000030653
I
ENSOGAG00000032929
Otolemur garnettii
ENSOGAG00000032929
I
ENSOGAG00000034677
Otolemur garnettii
ENSOGAG00000034677
I
ENSOARG00000011562
Ovis aries
ENSOARG00000011562
I
ENSOARG00000020447
Ovis aries
ENSOARG00000020447
I
ENSOARG00000020919
Ovis aries
ENSOARG00000020919
I
YBX3
Pan troglodytes
ENSPTRG00000004681
I
YBX1
Pan troglodytes
ENSPTRG00000006456
I
YBX2
Pan troglodytes
ENSPTRG00000008673
I
ENSPANG00000005177
Papio anubis
ENSPANG00000005177
I
ENSPANG00000010280
Papio anubis
ENSPANG00000010280
I
ENSPANG00000013156
Papio anubis
ENSPANG00000013156
I
ENSPANG00000016576
Papio anubis
ENSPANG00000016576
I
ENSPANG00000019627
Papio anubis
ENSPANG00000019627
I
ENSPANG00000024250
Papio anubis
ENSPANG00000024250
I
PHUM156710
Pediculus humanus
PHUM156710
I
ENSPSIG00000009247
Pelodiscus sinensis
ENSPSIG00000009247
I
ENSPSIG00000011017
Pelodiscus sinensis
ENSPSIG00000011017
I
ENSPSIG00000012364
Pelodiscus sinensis
ENSPSIG00000012364
I
ENSPFOG00000007181
Poecilia formosa
ENSPFOG00000007181
I
ENSPFOG00000011441
Poecilia formosa
ENSPFOG00000011441
I
Pvit_07856
Pogona vitticeps
Pvit_07856
I
Pvit_10025
Pogona vitticeps
Pvit_10025
I
ENSPPYG00000004279
Pongo abelii
ENSPPYG00000004279
I
YBX3
Procavia capensis
ENSPCAG00000001397
I
YBX2
Procavia capensis
ENSPCAG00000008019
I
YBX1
Pteropus vampyrus
ENSPVAG00000005504
I
YBX3
Pteropus vampyrus
ENSPVAG00000006740
I
Ybx3
Rattus norvegicus
ENSRNOG00000005480
I
Ybx2
Rattus norvegicus
ENSRNOG00000017117
I
Ybx1
Rattus norvegicus
ENSRNOG00000023786
I
LOC100912427
Rattus norvegicus
ENSRNOG00000032902
I
RPRC001993
Rhodnius prolixus
RPRC001993
I
Sakowv30002198m.g
Saccoglossus kowalevskii
Sakowv30002198m.g
I
ENSSHAG00000003262
Sarcophilus harrisii
ENSSHAG00000003262
I
ENSSHAG00000011350
Sarcophilus harrisii
ENSSHAG00000011350
I
ENSSHAG00000014452
Sarcophilus harrisii
ENSSHAG00000014452
I
SBAD_0000071701
Soboliphyme baturini
SBAD_0000071701
I
YBX2
Sorex araneus
ENSSARG00000000488
I
ENSSARG00000012628
Sorex araneus
ENSSARG00000012628
I
L893_g29692
Steinernema glaseri
L893_g29692
I
SPU_003107
Strongylocentrotus purpuratus
SPU_003107
I
SPAL_0000982100
Strongyloides papillosus
SPAL_0000982100
I
SSTP_0000685800
Strongyloides stercoralis
SSTP_0000685800
I
SVE_1573400
Strongyloides venezuelensis
SVE_1573400
I
YBX3
Sus scrofa
ENSSSCG00000000633
I
ENSSSCG00000008860
Sus scrofa
ENSSSCG00000008860
I
ENSSSCG00000012830
Sus scrofa
ENSSSCG00000012830
I
ENSSSCG00000015308
Sus scrofa
ENSSSCG00000015308
I
YBX2
Sus scrofa
ENSSSCG00000017938
I
ENSSSCG00000030357
Sus scrofa
ENSSSCG00000030357
I
YBX3
Taeniopygia guttata
ENSTGUG00000012047
I
YBX1
Taeniopygia guttata
ENSTGUG00000017262
I
ENSTRUG00000011813
Takifugu rubripes
ENSTRUG00000011813
I
ybx1
Takifugu rubripes
ENSTRUG00000015333
I
TELCIR_06115
Teladorsagia circumcincta
TELCIR_06115
I
YBX2
Tetraodon nigroviridis
ENSTNIG00000010139
I
ybx1
Tetraodon nigroviridis
ENSTNIG00000011989
I
TRE_0001884901
Trichobilharzia regenti
TRE_0001884901
I
YBX2
Tupaia belangeri
ENSTBEG00000001266
I
YBX3
Tupaia belangeri
ENSTBEG00000012570
I
YBX1
Tursiops truncatus
ENSTTRG00000001353
I
YBX3
Tursiops truncatus
ENSTTRG00000008045
I
Tal_R011198
Tyto alba
Tal_R011198
I
YBX1
Vicugna pacos
ENSVPAG00000000068
I
YBX3
Vicugna pacos
ENSVPAG00000000876
I
YBX2
Vicugna pacos
ENSVPAG00000003104
I
WUBG_03960
Wuchereria bancrofti
WUBG_03960
I
AAH42217
Xenopus laevis
AAH42217
I
AAI30161
Xenopus laevis
AAI30161
I
CAA42778
Xenopus laevis
CAA42778
I
ybx3.S
Xenopus laevis
XB-GENE-1007563
I
ybx2.L
Xenopus laevis
XB-GENE-6252609
I
ybx2.S
Xenopus laevis
XB-GENE-6254213
I
ybx1.S
Xenopus laevis
XB-GENE-865405
I
ybx3
Xenopus tropicalis
XB-GENE-1007558
I
ybx1
Xenopus tropicalis
XB-GENE-480746
I
ybx2
Xenopus tropicalis
XB-GENE-5798907
I
ENSXMAG00000015755
Xiphophorus maculatus
ENSXMAG00000015755
I
ENSXMAG00000018674
Xiphophorus maculatus
ENSXMAG00000018674
I