CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Cla011059
(
Citrullus lanatus
)
NAC/NAM
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF02365 (NAM)
IPR003441
Cla011059
T296557_2.00
GigaDB (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
NAC083
M02374_2.00
Arabidopsis thaliana
WYACGYAANN
NNTTRCGTRW
PBM
Weirauch et al.(2014)
pTH7308
0.893
0.802
NAC083
M07230_2.00
Arabidopsis thaliana
TRCKTRWNNNDYAMG
CKTRHNNNWYAMGYA
Dap-seq
OMalley et al.(2016)
ANAC083_colamp_a
0.893
0.802
NAC083
M07231_2.00
Arabidopsis thaliana
TTNCKTRWNNHDYACGYWA
TWRCGTRHDNNWYAMGNAA
Dap-seq
OMalley et al.(2016)
ANAC083_col_v3a
0.893
0.802
For this family, TFs with SR scores >
0.870
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Cla011059
NAC/NAM
15
138
PPGFRFHPTDEELVLQYLMKKALSSPLPAAVIPDADVCRFDPWDLPGDLERERYFFSTREAKYSNGRRSNRATGSGYWKATGIDRRIVSSKENRLVGFKKTLVFYTGKPPNGSRTDWVMHEYRL
Links
Other
NAC/NAM
family TFs
Other
Citrullus lanatus
TFs
16 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy