Lus10038937.g (Linum usitatissimum)
NAC/NAM

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF02365 (NAM) IPR003441 Lus10038937.g T298363_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
anac058
M00886_2.00 		Arabidopsis thaliana
CGTTGTCT
AGACAACG		 PBM
Franco-Zorrilla et al.(2014)
ANAC58 		0.926 0.789
anac058
M07210_2.00 		Arabidopsis thaliana
CKTGHNNNRCAMGYWA
TWRCKTGYNNNDCAMG		 Dap-seq
OMalley et al.(2016)
ANAC058_col_a 		0.926 0.789
anac058
M07211_2.00 		Arabidopsis thaliana
TDCKTGHNNNDCAMGHHA
TDDCKTGHNNNDCAMGHA		 Dap-seq
OMalley et al.(2016)
ANAC058_colamp_a 		0.926 0.789
ANAC038
M07188_2.00 		Arabidopsis thaliana
DNCKTRHNNHDCAMGYWA
TWRCKTGHDNNDYAMGNH		 Dap-seq
OMalley et al.(2016)
ANAC038_col_a 		0.879 0.711
ANAC038
M07189_2.00 		Arabidopsis thaliana
TTDCTTGWNNHDYAMGHHAHH
DDTDDCKTRHDNNWCAAGHAA		 Dap-seq
OMalley et al.(2016)
ANAC038_colamp_a 		0.879 0.711
For this family, TFs with SR scores > 0.870 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Lus10038937 NAC/NAM 7 133

Links

Other NAC/NAM family TFs
Other Linum usitatissimum TFs

130 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Alligator_sinensis_CCG016667.1 Alligator sinensis Alligator_sinensis_CCG016667.1 N
ENSAPLG00000014876 Anas platyrhynchos ENSAPLG00000014876 N
TRERF1 Anolis carolinensis ENSACAG00000001080 N
ENSBTAP00000020376-D1 Bos grunniens ENSBTAP00000020376-D1 N
TRERF1 Bos taurus ENSBTAG00000015321 N
TRERF1 Callithrix jacchus ENSCJAG00000004347 N
Aan_R011464 Calypte anna Aan_R011464 N
TRERF1 Canis familiaris ENSCAFG00000001642 N
TRERF1 Cavia porcellus ENSCPOG00000015717 N
Cmyd_10010458 Chelonia mydas Cmyd_10010458 N
TRERF1 Choloepus hoffmanni ENSCHOG00000006120 N
TRERF1 Equus caballus ENSECAG00000016971 N
TRERF1 Felis catus ENSFCAG00000011210 N
ENSFALG00000012590 Ficedula albicollis ENSFALG00000012590 N
TRERF1 Gallus gallus ENSGALG00000009896 N
TRERF1 Gorilla gorilla ENSGGOG00000012813 N
TRERF1 Homo sapiens ENSG00000124496 N
ENSSTOG00000022996 Ictidomys tridecemlineatus ENSSTOG00000022996 N
ENSLACG00000008926 Latimeria chalumnae ENSLACG00000008926 N
ENSLOCG00000017240 Lepisosteus oculatus ENSLOCG00000017240 N
TRERF1 Loxodonta africana ENSLAFG00000007825 N
ENSP00000362013 Macaca fascicularis ENSP00000362013 N
TRERF1 Meleagris gallopavo ENSMGAG00000013894 N
TRERF1 Monodelphis domestica ENSMODG00000019042 N
ENSMPUG00000013360 Mustela putorius furo ENSMPUG00000013360 N
Myotis_brandtii_Trerf1_10015386 Myotis brandtii Myotis_brandtii_Trerf1_10015386 N
TRERF1 Myotis lucifugus ENSMLUG00000016748 N
ENSNLEG00000004772 Nomascus leucogenys ENSNLEG00000004772 N
Ogr07462 Ophisaurus gracilis Ogr07462 N
TRERF1 Ornithorhynchus anatinus ENSOANG00000008467 N
TRERF1 Otolemur garnettii ENSOGAG00000025610 N
ENSOARG00000003358 Ovis aries ENSOARG00000003358 N
ENSPANG00000009451 Papio anubis ENSPANG00000009451 N
ENSPSIG00000009755 Pelodiscus sinensis ENSPSIG00000009755 N
Pvit_13408 Pogona vitticeps Pvit_13408 N
ENSPPYG00000016614 Pongo abelii ENSPPYG00000016614 N
TRERF1 Pteropus vampyrus ENSPVAG00000007626 N
Trerf1 Rattus norvegicus ENSRNOG00000022598 N
ENSSHAG00000004599 Sarcophilus harrisii ENSSHAG00000004599 N
TRERF1 Sus scrofa ENSSSCG00000001639 N
TRERF1 Taeniopygia guttata ENSTGUG00000003250 N
ENSTSYG00000003874 Tarsius syrichta ENSTSYG00000003874 N
ENSTBEG00000012133 Tupaia belangeri ENSTBEG00000012133 N
TRERF1 Tursiops truncatus ENSTTRG00000014065 N
trerf1 Xenopus tropicalis XB-GENE-940630 N