CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Pavir.J01198
(
Panicum virgatum
)
NAC/NAM
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF02365 (NAM)
IPR003441
Pavir.J01198
T298920_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Pavir.J01198.1.p
NAC/NAM
17
147
LPGFRFHPTEEELLEFYLKQVAQGKKLKFDIIPTLYRHDPWELPGLARIVGEREWYFFVPRDRKHHQAGAAGGRPSRTTERGFWKATGSDRAVRCAADPKRLIGLKKTLVYYEGRAPRGTKTDWVMNEYRL
Links
Other
NAC/NAM
family TFs
Other
Panicum virgatum
TFs
19 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ENSCJAG00000005187
Callithrix jacchus
ENSCJAG00000005187
I
ENSCJAG00000031139
Callithrix jacchus
ENSCJAG00000031139
I
ENSCAFG00000016282
Canis familiaris
ENSCAFG00000016282
I
ENSMMUG00000031258
Macaca mulatta
ENSMMUG00000031258
I
HMGB2
Ochotona princeps
ENSOPRG00000010124
I
ENSOGAG00000026034
Otolemur garnettii
ENSOGAG00000026034
I
ENSOGAG00000031524
Otolemur garnettii
ENSOGAG00000031524
I
ENSOGAG00000034481
Otolemur garnettii
ENSOGAG00000034481
N
AABR07009373.1
Rattus norvegicus
ENSRNOG00000011429
I
ENSTBEG00000013604
Tupaia belangeri
ENSTBEG00000013604
N