CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
CRE27544
(
Caenorhabditis remanei
)
Nuclear receptor
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00105 (zf-C4)
IPR001628
CRE27544
T302302_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
nhr-168
M00699_2.00
Caenorhabditis elegans
NNNHHCRNHN
NDNYGDDNNN
PBM
Narasimhan et al.(2015)
pTH10013
0.989
0.871
For this family, TFs with SR scores >
0.745
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
CRE27544
Nuclear receptor
48
119
TECSICGKTANGYHYDVPSCNGCKTFFRRLCISEKHFACKANGDCFDLTKRATPNKCRACRYEKCISAGMNP
Links
Other
Nuclear receptor
family TFs
Other
Caenorhabditis remanei
TFs
8 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
AMTR_s00006p00267240
Amborella trichopoda
AMTR_s00006p00267240
N
ATMYB63
Arabidopsis thaliana
AT1G79180
D
Gorai.001G169700
Gossypium raimondii
Gorai.001G169700
I
MDP0000132671
Malus domestica
MDP0000132671
N
MDP0000308403
Malus domestica
MDP0000308403
N
mgf025484m
Mimulus guttatus
mgf025484m
N