CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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CRE27544
(
Caenorhabditis remanei
)
Nuclear receptor
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00105 (zf-C4)
IPR001628
CRE27544
T302302_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
nhr-168
M00699_2.00
Caenorhabditis elegans
NNNHHCRNHN
NDNYGDDNNN
PBM
Narasimhan et al.(2015)
pTH10013
0.989
0.871
For this family, TFs with SR scores >
0.745
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
CRE27544
Nuclear receptor
48
119
TECSICGKTANGYHYDVPSCNGCKTFFRRLCISEKHFACKANGDCFDLTKRATPNKCRACRYEKCISAGMNP
Links
Other
Nuclear receptor
family TFs
Other
Caenorhabditis remanei
TFs
8 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
nhr-168
Caenorhabditis elegans
WBGene00008221
D
0.989
CRE09109
Caenorhabditis remanei
CRE09109
I
0.968
nhr-60
Caenorhabditis elegans
WBGene00003650
I
0.961
CBN20373
Caenorhabditis brenneri
CBN20373
I
0.947
CBG22907
Caenorhabditis briggsae
CBG22907
I
0.905
nhr-141
Caenorhabditis elegans
WBGene00017787
I
0.878
nhr-116
Caenorhabditis elegans
WBGene00003706
I
0.824
CJA16466
Caenorhabditis japonica
CJA16466
I
0.771