CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Brh_R011230
(
Buceros rhinoceros
)
Nuclear receptor
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00105 (zf-C4)
IPR001628
Brh_R011230
T306576_2.00
GigaDB (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
Esrrb
M00815_2.00
Mus musculus
NVAAGGTCRN
NYGACCTTBN
PBM
Weirauch et al.(2013)
pTH2311
0.930
0.493
For this family, TFs with SR scores >
0.745
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Brh_R011230
Nuclear receptor
274
343
TXCAVCGDNAACQHYGVRTCEGCKGFFKRTVQKNAKYVCLANKNCPVDKRRRNRCQYCRFQKCLSVGMVK
Links
Other
Nuclear receptor
family TFs
Other
Buceros rhinoceros
TFs
7 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
AGOS_AAL057C
Ashbya gossypii
AGOS_AAL057C
I
CAGL0H01507g
Candida glabrata
CAGL0H01507g
I
Ecym_3200
Eremothecium cymbalariae
Ecym_3200
I
KAFR_0E01300
Kazachstania africana
KAFR_0E01300
I
SAKL0G09768g
Lachancea kluyveri
SAKL0G09768g
I
NCAS_0F02700
Naumovozyma castellii
NCAS_0F02700
I
NDAI_0C04170
Naumovozyma dairenensis
NDAI_0C04170
I
SU7_1441
Saccharomyces arboricola
SU7_1441
I
SU7_2665
Saccharomyces arboricola
SU7_2665
I
4894_YDR303C
Saccharomyces bayanus
4894_YDR303C
I
10337_Multiple
Saccharomyces bayanus
10337_Multiple
I
Scas_Contig588.11
Saccharomyces castellii
Scas_Contig588.11
I
RSC30
Saccharomyces cerevisiae
YHR056C
D
SKUD_196709
Saccharomyces kudriavzevii
SKUD_196709
I
9825_Multiple
Saccharomyces mikatae
9825_Multiple
I
4855_Multiple
Saccharomyces paradoxus
4855_Multiple
I
10181_Multiple
Saccharomyces paradoxus
10181_Multiple
I
AACERI_AaceriAAL057C
Saccharomycetaceae sp ashbya aceri
AACERI_AaceriAAL057C
I
TBLA_0C03390
Tetrapisispora blattae
TBLA_0C03390
I
TPHA_0E01290
Tetrapisispora phaffii
TPHA_0E01290
I
TDEL_0E03050
Torulaspora delbrueckii
TDEL_0E03050
I
Kpol_1023p41
Vanderwaltozyma polyspora
Kpol_1023p41
I
Kpol_1005p2
Vanderwaltozyma polyspora
Kpol_1005p2
I
ZBAI_09770
Zygosaccharomyces bailii
ZBAI_09770
I
ZBAI_03963
Zygosaccharomyces bailii
ZBAI_03963
I
ZYRO0C13882g
Zygosaccharomyces rouxii
ZYRO0C13882g
I