CBG23697_CONSTRUCT (PBM CONSTRUCTS)
Nuclear receptor

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00105 (zf-C4) IPR001628 CBG23697_CONSTRUCT T306948_2.00 HughesLab (2013-Jun-13)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
CBG23697_CONSTRUCT
M01299_2.00		 PBM CONSTRUCTS
NNTKTGTGTYN
NRACACAMANN		 PBM
Lambert et al.(2019)
pTH11459		 (Direct) (Direct)

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
For this family, TFs with SR scores > 0.745 will likely have a similar motif

Experimental Constructs

Motif ID Domain From To Sequence
M01299_2.00 Nuclear receptor 11 74

DNA Binding Domains

Protein ID Domain From To Sequence
CBG23697_CONSTRUCT Nuclear receptor 11 74

Links

Other Nuclear receptor family TFs
Other PBM CONSTRUCTS TFs

6 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ULT2 Arabidopsis lyrata fgenesh2_kg.3__3624__AT2G20825.1 N
ULT2 Arabidopsis thaliana AT2G20825 N
Bostr.7867s0654 Boechera stricta Bostr.7867s0654 N
Bostr.7903s0074 Boechera stricta Bostr.7903s0074 N
Bo00902s070 Brassica oleracea Bo00902s070 N
Bo7g111950 Brassica oleracea Bo7g111950 N
Bra036504 Brassica rapa Bra036504 N
Cagra.1225s0078 Capsella grandiflora Cagra.1225s0078 N
Carubv10005638m.g Capsella rubella Carubv10005638m.g N
Carubv10014550m.g Capsella rubella Carubv10014550m.g N
Thhalv10002089m.g Eutrema salsugineum Thhalv10002089m.g N
chr3.CM0711.550.nd Lotus japonicus chr3.CM0711.550.nd N
MTR_2g090080 Medicago truncatula MTR_2g090080 N
Solyc07g054450.2 Solanum lycopersicum Solyc07g054450.2 N
PGSC0003DMG400018322 Solanum tuberosum PGSC0003DMG400018322 N