CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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ACUA011505
(
Anopheles culicifacies
)
Nuclear receptor
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00105 (zf-C4)
IPR001628
ACUA011505
T307545_2.00
Vectorbase (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
AGAP010438
M02389_2.00
Anopheles gambiae
NRGDKCRNN
NNYGMHCYN
PBM
Weirauch et al.(2014)
pTH6429
0.988
1.000
knrl
M03930_2.00
Drosophila melanogaster
AWNTRGRKCAN
NTGMYCYANWT
SELEX
Nitta et al.(2015)
knrl_1
0.987
0.957
knrl
M03931_2.00
Drosophila melanogaster
AWBBGTAACR
YGTTACVVWT
SELEX
Nitta et al.(2015)
knrl_2
0.987
0.957
knrl
M06422_2.00
Drosophila melanogaster
AAABTRGRKCA
TGMYCYAVTTT
B1H
Zhu et al.(2011)
knrl_SANGER_5_FBgn0001323
0.987
0.957
kni
M06557_2.00
Drosophila melanogaster
AAWNTAGRGCAV
BTGCYCTANWTT
B1H
Mathelier et al.(2014)
MA0451.1
0.983
0.871
kni
M06419_2.00
Drosophila melanogaster
RAWNKVGNWC
GWNCBMNWTY
B1H
Zhu et al.(2011)
kni_FlyReg_FBgn0001320
0.983
0.871
kni
M06420_2.00
Drosophila melanogaster
AAWNTAGRGCAV
BTGCYCTANWTT
B1H
Zhu et al.(2011)
kni_NAR_FBgn0001320
0.983
0.871
kni
M06421_2.00
Drosophila melanogaster
RWAANTRGRNCA
TGNYCYANTTWY
B1H
Zhu et al.(2011)
kni_SANGER_5_FBgn0001320
0.983
0.871
kni
M08225_2.00
Drosophila melanogaster
YAGNGYTGYC
GRCARCNCTR
ChIP-seq
Contrino et al.(2012)
Mf24
0.983
0.871
kni
M09687_2.00
Drosophila melanogaster
NAAWNKRGADCAV
BTGHTCYMNWTTN
Misc
Kulakovskiy et al.(2009)
kni
0.983
0.871
kni
M11189_2.00
Drosophila melanogaster
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
I$KNI_Q6
0.983
0.871
eg
M03927_2.00
Drosophila melanogaster
NAAAYTRGAKCA
TGMTCYARTTTN
SELEX
Nitta et al.(2015)
eg_1
0.969
0.843
eg
M06415_2.00
Drosophila melanogaster
RAAANTAGRGCAV
BTGCYCTANTTTY
B1H
Zhu et al.(2011)
eg_SANGER_5_FBgn0000560
0.969
0.843
For this family, TFs with SR scores >
0.745
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ACUA011505-PA
Nuclear receptor
85
155
QQCKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLSSISECKNNGECIINKKNRTACKACRLRKCLMVGMSK
Links
Other
Nuclear receptor
family TFs
Other
Anopheles culicifacies
TFs
93 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ENSAMEG00000000033
Ailuropoda melanoleuca
ENSAMEG00000000033
I
HINFP
Callithrix jacchus
ENSCJAG00000013942
I
Aan_R014383
Calypte anna
Aan_R014383
I
HINFP
Canis familiaris
ENSCAFG00000012224
I
HINFP
Cavia porcellus
ENSCPOG00000006488
I
ENSCSAG00000002522
Chlorocebus sabaeus
ENSCSAG00000002522
I
HINFP
Dasypus novemcinctus
ENSDNOG00000025019
N
HINFP
Equus caballus
ENSECAG00000024938
I
HINFP
Felis catus
ENSFCAG00000001165
I
HINFP
Gorilla gorilla
ENSGGOG00000008087
I
HINFP
Homo sapiens
ENSG00000172273
D
ENSSTOG00000014457
Ictidomys tridecemlineatus
ENSSTOG00000014457
I
HINFP
Loxodonta africana
ENSLAFG00000017500
I
ENSP00000318085
Macaca fascicularis
ENSP00000318085
I
HINFP
Macaca mulatta
ENSMMUG00000014877
I
ENSMEUG00000015482
Macropus eugenii
ENSMEUG00000015482
I
HINFP
Microcebus murinus
ENSMICG00000002733
I
ENSMPUG00000005286
Mustela putorius furo
ENSMPUG00000005286
I
Myotis_brandtii_HINFP_10033522
Myotis brandtii
Myotis_brandtii_HINFP_10033522
I
HINFP
Myotis lucifugus
ENSMLUG00000000455
I
ENSNLEG00000007387
Nomascus leucogenys
ENSNLEG00000007387
I
HINFP
Oryctolagus cuniculus
ENSOCUG00000010808
N
HINFP
Otolemur garnettii
ENSOGAG00000007304
I
HINFP
Pan troglodytes
ENSPTRG00000004372
I
ENSPANG00000005040
Papio anubis
ENSPANG00000005040
I
ENSPPYG00000003957
Pongo abelii
ENSPPYG00000003957
I
HINFP
Pteropus vampyrus
ENSPVAG00000005598
I
ENSSHAG00000009681
Sarcophilus harrisii
ENSSHAG00000009681
I
HINFP
Sus scrofa
ENSSSCG00000015112
I
ENSTSYG00000012226
Tarsius syrichta
ENSTSYG00000012226
I
HINFP
Tursiops truncatus
ENSTTRG00000002809
I