ALUE_0000980501 (Ascaris lumbricoides)
Nuclear receptor

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00105 (zf-C4) IPR001628 ALUE_0000980501 T307947_2.00 WormBase:ParaSite (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
odr-7
M00697_2.00 		Caenorhabditis elegans
NDWTTGTAGNN
NNCTACAAWHN		 PBM
Narasimhan et al.(2015)
pTH9323 		0.901 0.771
For this family, TFs with SR scores > 0.745 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ALUE_0000980501-mRNA-1 Nuclear receptor 176 250

Links

Other Nuclear receptor family TFs
Other Ascaris lumbricoides TFs

30 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
AMTR_s00089p00043950 Amborella trichopoda AMTR_s00089p00043950 N 0.000
Aquca_005_00478 Aquilegia coerulea Aquca_005_00478 N 0.000
Aquca_034_00130 Aquilegia coerulea Aquca_034_00130 N 0.000
fgenesh1_pg.C_scaffold_1002057 Arabidopsis lyrata fgenesh1_pg.C_scaffold_1002057 N 0.000
fgenesh1_pm.C_scaffold_6002861 Arabidopsis lyrata fgenesh1_pm.C_scaffold_6002861 N 0.000
FMA Arabidopsis lyrata scaffold_302925.1 N 0.000
AT1G22490 Arabidopsis thaliana AT1G22490 N 0.000
BHLH96 Arabidopsis thaliana AT1G72210 N 0.000
FAMA Arabidopsis thaliana AT3G24140 N 0.000
Bostr.10273s0131 Boechera stricta Bostr.10273s0131 N 0.000
Bostr.12659s0103 Boechera stricta Bostr.12659s0103 N 0.000
Bostr.19424s0222 Boechera stricta Bostr.19424s0222 N 0.000
Bo1g101110 Brassica oleracea Bo1g101110 N 0.000
Bo2g075510 Brassica oleracea Bo2g075510 N 0.000
Bo3g082010 Brassica oleracea Bo3g082010 N 0.000
Bo5g038570 Brassica oleracea Bo5g038570 N 0.000
Bo6g092570 Brassica oleracea Bo6g092570 N 0.000
Bo6g114730 Brassica oleracea Bo6g114730 N 0.000
Bo7g037540 Brassica oleracea Bo7g037540 N 0.000
Bo7g057920 Brassica oleracea Bo7g057920 N 0.000
Bo8g071490 Brassica oleracea Bo8g071490 N 0.000
Bra001929 Brassica rapa Bra001929 N 0.000
Bra003886 Brassica rapa Bra003886 N 0.000
Bra008017 Brassica rapa Bra008017 N 0.000
Bra012329 Brassica rapa Bra012329 N 0.000
Bra016080 Brassica rapa Bra016080 N 0.000
Bra016377 Brassica rapa Bra016377 N 0.000
Bra028357 Brassica rapa Bra028357 N 0.000
Bra040856 Brassica rapa Bra040856 N 0.000
PK04856.1 Cannabis sativa PK04856.1 N 0.000
PK14736.1 Cannabis sativa PK14736.1 N 0.000
PK21294.1 Cannabis sativa PK21294.1 N 0.000
PK28391.1 Cannabis sativa PK28391.1 N 0.000
Cagra.0026s0026 Capsella grandiflora Cagra.0026s0026 N 0.000
Cagra.0114s0053 Capsella grandiflora Cagra.0114s0053 N 0.000
Cagra.4006s0007 Capsella grandiflora Cagra.4006s0007 N 0.000
Carubv10011476m.g Capsella rubella Carubv10011476m.g N 0.000
Carubv10013821m.g Capsella rubella Carubv10013821m.g N 0.000
Carubv10020657m.g Capsella rubella Carubv10020657m.g N 0.000
evm.TU.supercontig_36.191 Carica papaya evm.TU.supercontig_36.191 N 0.000
evm.TU.supercontig_48.15 Carica papaya evm.TU.supercontig_48.15 N 0.000
evm.TU.supercontig_59.132 Carica papaya evm.TU.supercontig_59.132 N 0.000
Ca_01181 Cicer arietinum Ca_01181 N 0.000
Ca_12363 Cicer arietinum Ca_12363 N 0.000
Ca_16010 Cicer arietinum Ca_16010 N 0.000
Ca_28086 Cicer arietinum Ca_28086 N 0.000
Cla005338 Citrullus lanatus Cla005338 N 0.000
Cla020173 Citrullus lanatus Cla020173 N 0.000
Cla021744 Citrullus lanatus Cla021744 N 0.000
Cla022458 Citrullus lanatus Cla022458 N 0.000
Ciclev10001811m.g Citrus clementina Ciclev10001811m.g N 0.000
Ciclev10005031m.g Citrus clementina Ciclev10005031m.g N 0.000
Ciclev10026131m.g Citrus clementina Ciclev10026131m.g N 0.000
orange1.1g014477m.g Citrus sinensis orange1.1g014477m.g N 0.000
orange1.1g020210m.g Citrus sinensis orange1.1g020210m.g N 0.000
orange1.1g036531m.g Citrus sinensis orange1.1g036531m.g N 0.000
orange1.1g043618m.g Citrus sinensis orange1.1g043618m.g N 0.000
Cucsa.091670 Cucumis sativus Cucsa.091670 N 0.000
Cucsa.160250 Cucumis sativus Cucsa.160250 N 0.000
Cucsa.163550 Cucumis sativus Cucsa.163550 N 0.000
Cucsa.256420 Cucumis sativus Cucsa.256420 N 0.000
Eucgr.B00048 Eucalyptus grandis Eucgr.B00048 N 0.000
Eucgr.E00273 Eucalyptus grandis Eucgr.E00273 N 0.000
Eucgr.H04468 Eucalyptus grandis Eucgr.H04468 N 0.000
Eucgr.H04738 Eucalyptus grandis Eucgr.H04738 N 0.000
Thhalv10002558m.g Eutrema salsugineum Thhalv10002558m.g N 0.000
Thhalv10009836m.g Eutrema salsugineum Thhalv10009836m.g N 0.000
Thhalv10018867m.g Eutrema salsugineum Thhalv10018867m.g N 0.000
gene02199-v1.0-hybrid Fragaria vesca gene02199-v1.0-hybrid N 0.000
gene12030-v1.0-hybrid Fragaria vesca gene12030-v1.0-hybrid N 0.000
gene22289-v1.0-hybrid Fragaria vesca gene22289-v1.0-hybrid N 0.000
GLYMA01G23230 Glycine max GLYMA01G23230 N 0.000
GLYMA02G14290 Glycine max GLYMA02G14290 N 0.000
GLYMA02G37313 Glycine max GLYMA02G37313 N 0.000
GLYMA03G39990 Glycine max GLYMA03G39990 N 0.000
GLYMA04G10630 Glycine max GLYMA04G10630 N 0.000
GLYMA06G10470 Glycine max GLYMA06G10470 N 0.000
GLYMA06G35330 Glycine max GLYMA06G35330 N 0.000
GLYMA08G36590 Glycine max GLYMA08G36590 N 0.000
GLYMA14G35560 Glycine max GLYMA14G35560 N 0.000
GLYMA19G42520 Glycine max GLYMA19G42520 N 0.000
GLYMA20G37550 Glycine max GLYMA20G37550 N 0.000
Gorai.005G094800 Gossypium raimondii Gorai.005G094800 N 0.000
Gorai.006G217200 Gossypium raimondii Gorai.006G217200 N 0.000
Gorai.008G225800 Gossypium raimondii Gorai.008G225800 N 0.000
Gorai.009G233000 Gossypium raimondii Gorai.009G233000 N 0.000
Gorai.011G159100 Gossypium raimondii Gorai.011G159100 N 0.000
Gorai.013G204300 Gossypium raimondii Gorai.013G204300 N 0.000
MLOC_21759 Hordeum vulgare MLOC_21759 N 0.000
LPERR08G15350 Leersia perrieri LPERR08G15350 N 0.000
LPERR09G09700 Leersia perrieri LPERR09G09700 N 0.000
Lus10000332.g Linum usitatissimum Lus10000332.g N 0.000
Lus10001271.g Linum usitatissimum Lus10001271.g N 0.000
Lus10009475.g Linum usitatissimum Lus10009475.g N 0.000
Lus10010101.g Linum usitatissimum Lus10010101.g N 0.000
Lus10012603.g Linum usitatissimum Lus10012603.g N 0.000
Lus10015902.g Linum usitatissimum Lus10015902.g N 0.000
Lus10016680.g Linum usitatissimum Lus10016680.g N 0.000
Lus10029950.g Linum usitatissimum Lus10029950.g N 0.000
chr1.CM0544.580.nd Lotus japonicus chr1.CM0544.580.nd N 0.000
chr1.LjT16B05.110.nd Lotus japonicus chr1.LjT16B05.110.nd N 0.000
chr1.LjT40H13.220.nd Lotus japonicus chr1.LjT40H13.220.nd N 0.000
chr5.CM0211.190.nc Lotus japonicus chr5.CM0211.190.nc N 0.000
chr6.CM0738.340.nd Lotus japonicus chr6.CM0738.340.nd N 0.000
MDP0000267178 Malus domestica MDP0000267178 N 0.000
MDP0000646823 Malus domestica MDP0000646823 N 0.000
MDP0000672131 Malus domestica MDP0000672131 N 0.000
MDP0000944210 Malus domestica MDP0000944210 N 0.000
cassava13431.valid.m1 Manihot esculenta cassava13431.valid.m1 N 0.000
cassava19507.valid.m1 Manihot esculenta cassava19507.valid.m1 N 0.000
cassava22781.valid.m1 Manihot esculenta cassava22781.valid.m1 N 0.000
cassava27750.m1 Manihot esculenta cassava27750.m1 N 0.000
cassava27856.m1 Manihot esculenta cassava27856.m1 N 0.000
cassava31098.valid.m1 Manihot esculenta cassava31098.valid.m1 N 0.000
cassava34492.m1 Manihot esculenta cassava34492.m1 N 0.000
cassava35271.valid.m1 Manihot esculenta cassava35271.valid.m1 N 0.000
MTR_0194s0050 Medicago truncatula MTR_0194s0050 N 0.000
MTR_3g099620 Medicago truncatula MTR_3g099620 N 0.000
MTR_5g064950 Medicago truncatula MTR_5g064950 N 0.000
MTR_7g113830 Medicago truncatula MTR_7g113830 N 0.000
MTR_8g066770 Medicago truncatula MTR_8g066770 N 0.000
mgf015694m Mimulus guttatus mgf015694m N 0.000
GSMUA_Achr10G30300_001 Musa acuminata GSMUA_Achr10G30300_001 N 0.000
GSMUA_Achr7G12790_001 Musa acuminata GSMUA_Achr7G12790_001 N 0.000
GSMUA_Achr8G17650_001 Musa acuminata GSMUA_Achr8G17650_001 N 0.000
OBART02G33270 Oryza barthii OBART02G33270 N 0.000
OBART10G08120 Oryza barthii OBART10G08120 N 0.000
OB02G40170 Oryza brachyantha OB02G40170 N 0.000
OB03G16590 Oryza brachyantha OB03G16590 N 0.000
OB09G19960 Oryza brachyantha OB09G19960 N 0.000
OB10G16200 Oryza brachyantha OB10G16200 N 0.000
ORGLA02G0287300 Oryza glaberrima ORGLA02G0287300 N 0.000
ORGLA09G0101900 Oryza glaberrima ORGLA09G0101900 N 0.000
ORGLA10G0067600 Oryza glaberrima ORGLA10G0067600 N 0.000
OGLUM02G33770 Oryza glumaepatula OGLUM02G33770 N 0.000
OGLUM10G07850 Oryza glumaepatula OGLUM10G07850 N 0.000
BGIOSGA005582 Oryza indica BGIOSGA005582 N 0.000
BGIOSGA030936 Oryza indica BGIOSGA030936 N 0.000
BGIOSGA032814 Oryza indica BGIOSGA032814 N 0.000
OMERI02G31750 Oryza meridionalis OMERI02G31750 N 0.000
OMERI09G10430 Oryza meridionalis OMERI09G10430 N 0.000
ONIVA02G35790 Oryza nivara ONIVA02G35790 N 0.000
ONIVA09G13890 Oryza nivara ONIVA09G13890 N 0.000
ONIVA10G07810 Oryza nivara ONIVA10G07810 N 0.000
OPUNC02G30580 Oryza punctata OPUNC02G30580 N 0.000
OPUNC03G06240 Oryza punctata OPUNC03G06240 N 0.000
OPUNC09G11790 Oryza punctata OPUNC09G11790 N 0.000
OPUNC10G07050 Oryza punctata OPUNC10G07050 N 0.000
ORUFI02G34810 Oryza rufipogon ORUFI02G34810 N 0.000
ORUFI09G14410 Oryza rufipogon ORUFI09G14410 N 0.000
ORUFI10G08570 Oryza rufipogon ORUFI10G08570 N 0.000
OS09G0468700 Oryza sativa OS09G0468700 N 0.000
OS10G0376900 Oryza sativa OS10G0376900 N 0.000
Pavir.Aa00538 Panicum virgatum Pavir.Aa00538 N 0.000
Pavir.Bb02386 Panicum virgatum Pavir.Bb02386 N 0.000
Pavir.Db01842 Panicum virgatum Pavir.Db01842 N 0.000
Pavir.Fb01787 Panicum virgatum Pavir.Fb01787 N 0.000
Pavir.Ia02758 Panicum virgatum Pavir.Ia02758 N 0.000
Pavir.Ia03109 Panicum virgatum Pavir.Ia03109 N 0.000
Pavir.Ia04907 Panicum virgatum Pavir.Ia04907 N 0.000
Pavir.Ib02778 Panicum virgatum Pavir.Ib02778 N 0.000
Pavir.J22933 Panicum virgatum Pavir.J22933 N 0.000
Pavir.J40759 Panicum virgatum Pavir.J40759 N 0.000
POPTR_0001s32160 Populus trichocarpa POPTR_0001s32160 N 0.000
POPTR_0002s10230 Populus trichocarpa POPTR_0002s10230 N 0.000
POPTR_0005s04160 Populus trichocarpa POPTR_0005s04160 N 0.000
POPTR_0005s07210 Populus trichocarpa POPTR_0005s07210 N 0.000
POPTR_0007s04950 Populus trichocarpa POPTR_0007s04950 N 0.000
POPTR_0013s02680 Populus trichocarpa POPTR_0013s02680 N 0.000
POPTR_0017s08160 Populus trichocarpa POPTR_0017s08160 N 0.000
Pm003380 Prunus mume Pm003380 N 0.000
Pm004489 Prunus mume Pm004489 N 0.000
Pm009474 Prunus mume Pm009474 N 0.000
Pm023207 Prunus mume Pm023207 N 0.000
PRUPE_ppa009461mg Prunus persica PRUPE_ppa009461mg N 0.000
PRUPE_ppa011095mg Prunus persica PRUPE_ppa011095mg N 0.000
PRUPE_ppa017746mg Prunus persica PRUPE_ppa017746mg N 0.000
PRUPE_ppa020429mg Prunus persica PRUPE_ppa020429mg N 0.000
29904.m002956 Ricinus communis 29904.m002956 N 0.000
29908.m006098 Ricinus communis 29908.m006098 N 0.000
30054.m000819 Ricinus communis 30054.m000819 N 0.000
30128.m008737 Ricinus communis 30128.m008737 N 0.000
SapurV1A.0039s0400 Salix purpurea SapurV1A.0039s0400 N 0.000
SapurV1A.0092s0130 Salix purpurea SapurV1A.0092s0130 N 0.000
SapurV1A.0311s0110 Salix purpurea SapurV1A.0311s0110 N 0.000
SapurV1A.0462s0070 Salix purpurea SapurV1A.0462s0070 N 0.000
SapurV1A.0613s0120 Salix purpurea SapurV1A.0613s0120 N 0.000
SapurV1A.1055s0160 Salix purpurea SapurV1A.1055s0160 N 0.000
SapurV1A.1124s0170 Salix purpurea SapurV1A.1124s0170 N 0.000
SapurV1A.3502s0020 Salix purpurea SapurV1A.3502s0020 N 0.000
SELMODRAFT_428659 Selaginella moellendorffii SELMODRAFT_428659 N 0.000
SELMODRAFT_430716 Selaginella moellendorffii SELMODRAFT_430716 N 0.000
Si013925m.g Setaria italica Si013925m.g N 0.000
Si017701m.g Setaria italica Si017701m.g N 0.000
Si036568m.g Setaria italica Si036568m.g N 0.000
Si038653m.g Setaria italica Si038653m.g N 0.000
Solyc05g053660.1 Solanum lycopersicum Solyc05g053660.1 N 0.000
Solyc08g076820.2 Solanum lycopersicum Solyc08g076820.2 N 0.000
Solyc09g091760.1 Solanum lycopersicum Solyc09g091760.1 N 0.000
PGSC0003DMG400002125 Solanum tuberosum PGSC0003DMG400002125 N 0.000
PGSC0003DMG400015760 Solanum tuberosum PGSC0003DMG400015760 N 0.000
PGSC0003DMG400017540 Solanum tuberosum PGSC0003DMG400017540 N 0.000
PGSC0003DMG400028578 Solanum tuberosum PGSC0003DMG400028578 N 0.000
PGSC0003DMG400029634 Solanum tuberosum PGSC0003DMG400029634 N 0.000
Sb0012s004780 Sorghum bicolor Sb0012s004780 N 0.000
Sb01g044640 Sorghum bicolor Sb01g044640 N 0.000
Sb02g027210 Sorghum bicolor Sb02g027210 N 0.000
Sb04g027280 Sorghum bicolor Sb04g027280 N 0.000
TCM_015694 Theobroma cacao TCM_015694 N 0.000
TCM_020336 Theobroma cacao TCM_020336 N 0.000
TCM_026599 Theobroma cacao TCM_026599 N 0.000
TCM_034439 Theobroma cacao TCM_034439 N 0.000
Traes_5BL_DA72CE20D Triticum aestivum Traes_5BL_DA72CE20D N 0.000
TRIUR3_09788 Triticum urartu TRIUR3_09788 N 0.000
FMA Vitis vinifera VIT_05s0029g00050 N 0.000
VIT_14s0128g00110 Vitis vinifera VIT_14s0128g00110 N 0.000
VIT_18s0001g06650 Vitis vinifera VIT_18s0001g06650 N 0.000
AC233899.1_FG002 Zea mays AC233899.1_FG002 N 0.000
GRMZM2G008691 Zea mays GRMZM2G008691 N 0.000
GRMZM2G015666 Zea mays GRMZM2G015666 N 0.000
GRMZM2G045883 Zea mays GRMZM2G045883 N 0.000
GRMZM2G082586 Zea mays GRMZM2G082586 N 0.000