CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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augustus_masked-nMf.1.1.scaf18998-processed-gene-0.0
(
Meloidogyne floridensis
)
Nuclear receptor
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00105 (zf-C4)
IPR001628
augustus_masked-nMf.1.1.scaf18998-processed-gene-0.0
T308223_2.00
WormBase:ParaSite (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
augustus_masked-nMf.1.1.scaf18998-processed-gene-0.0-mRNA-1
Nuclear receptor
67
130
TECCICERIASGYLFYGVNCCDGCKHFFNRSITSKNKYKCEKDGNCNLSNSNFLQLNVIWVKGC
Links
Other
Nuclear receptor
family TFs
Other
Meloidogyne floridensis
TFs
5 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
AGOS_ABR055C
Ashbya gossypii
AGOS_ABR055C
I
CaO19.610
Candida albicans
CaO19.610
I
CaO19.8243
Candida albicans
CaO19.8243
I
CD36_33560
Candida dubliniensis
CD36_33560
I
PGUG_03651
Candida guilliermondii
PGUG_03651
I
CLUG_02047
Candida lusitaniae
CLUG_02047
I
G210_4810
Candida maltosa
G210_4810
I
CORT_0G01760
Candida orthopsilosis
CORT_0G01760
I
CPAG_00178
Candida parapsilosis
CPAG_00178
I
CLUG_02047
Clavispora lusitaniae
CLUG_02047
I
DEHA2E10978g
Debaryomyces hansenii
DEHA2E10978g
I
Ecym_4584
Eremothecium cymbalariae
Ecym_4584
I
KAFR_0B01410
Kazachstania africana
KAFR_0B01410
I
KAFR_0A02120
Kazachstania africana
KAFR_0A02120
I
KLLA0_F04840g
Kluyveromyces lactis
KLLA0_F04840g
I
Kwal_8176
Kluyveromyces waltii
Kwal_8176
I
PAS_chr1-4_0530
Komagataella pastoris
PAS_chr1-4_0530
I
KUCA_T00004103001
Kuraishia capsulata
KUCA_T00004103001
I
SAKL0D13442g
Lachancea kluyveri
SAKL0D13442g
I
LALA0_S02e00628g
Lachancea lanzarotensis
LALA0_S02e00628g
I
LELG_05390
Lodderomyces elongisporus
LELG_05390
I
PGUG_03651
Meyerozyma guilliermondii
PGUG_03651
I
GNLVRS01_PISO0E14370g
Millerozyma farinosa
GNLVRS01_PISO0E14370g
I
GNLVRS01_PISO0F15757g
Millerozyma farinosa
GNLVRS01_PISO0F15757g
I
HPODL_01835
Ogataea parapolymorpha
HPODL_01835
I
HPODL_04965
Ogataea parapolymorpha
HPODL_04965
I
JL09_g3139
Pichia kudriavzevii
JL09_g3139
I
XP_002490663.1
Pichia pastoris
XP_002490663.1
I
estExt_fgenesh1_pg.C_chr_3.10654
Pichia stipitis
estExt_fgenesh1_pg.C_chr_3.10654
I
SU7_2504
Saccharomyces arboricola
SU7_2504
I
17689_YMR016C
Saccharomyces bayanus
17689_YMR016C
I
SOK2
Saccharomyces cerevisiae
YMR016C
D
SKUD_205409
Saccharomyces kudriavzevii
SKUD_205409
I
SKUD_205603
Saccharomyces kudriavzevii
SKUD_205603
I
16462_YMR016C
Saccharomyces mikatae
16462_YMR016C
I
17269_YMR016C
Saccharomyces paradoxus
17269_YMR016C
I
AACERI_AaceriABR055C
Saccharomycetaceae sp ashbya aceri
AACERI_AaceriABR055C
I
PICST_67427
Scheffersomyces stipitis
PICST_67427
I
SPAPADRAFT_59209
Spathaspora passalidarum
SPAPADRAFT_59209
I
TDEL_0B06530
Torulaspora delbrueckii
TDEL_0B06530
I
BN7_6724
Wickerhamomyces ciferrii
BN7_6724
I
ZBAI_08486
Zygosaccharomyces bailii
ZBAI_08486
I
ZYRO0E06248g
Zygosaccharomyces rouxii
ZYRO0E06248g
I