CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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HPLM_0000487701
(
Haemonchus placei
)
Nuclear receptor
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00105 (zf-C4)
IPR001628
HPLM_0000487701
T308891_2.00
WormBase:ParaSite (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
HPLM_0000487701-mRNA-1
Nuclear receptor
31
100
RQCTICSAPSNGYHFNAPSCSACAAFFRRTVTLGRHFLCAHQGNCKVHFEMRVICRACRYAKCIQMGMER
Links
Other
Nuclear receptor
family TFs
Other
Haemonchus placei
TFs
13 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
AMTR_s00010p00254240
Amborella trichopoda
AMTR_s00010p00254240
N
evm.TU.supercontig_14.15
Carica papaya
evm.TU.supercontig_14.15
N
Ciclev10013209m.g
Citrus clementina
Ciclev10013209m.g
N
Cucsa.197610
Cucumis sativus
Cucsa.197610
N
Eucgr.B03420
Eucalyptus grandis
Eucgr.B03420
N
gene28320-v1.0-hybrid
Fragaria vesca
gene28320-v1.0-hybrid
N
GLYMA04G34080
Glycine max
GLYMA04G34080
N
GLYMA06G20400
Glycine max
GLYMA06G20400
N
GLYMA13G05280
Glycine max
GLYMA13G05280
N
Gorai.006G021800
Gossypium raimondii
Gorai.006G021800
N
Gorai.001G256200
Gossypium raimondii
Gorai.001G256200
N
LjSGA_010689.2
Lotus japonicus
LjSGA_010689.2
N
MDP0000320691
Malus domestica
MDP0000320691
N
MDP0000799392
Malus domestica
MDP0000799392
N
cassava35255.valid.m1
Manihot esculenta
cassava35255.valid.m1
N
cassava39091.m1
Manihot esculenta
cassava39091.m1
N
MTR_6g011670
Medicago truncatula
MTR_6g011670
N
Pm015864
Prunus mume
Pm015864
N
Pm006527
Prunus mume
Pm006527
N
Pm006526
Prunus mume
Pm006526
N
PRUPE_ppa016030mg
Prunus persica
PRUPE_ppa016030mg
N
PRUPE_ppa014004mg
Prunus persica
PRUPE_ppa014004mg
N
29736.m002007
Ricinus communis
29736.m002007
N
SapurV1A.1252s0010
Salix purpurea
SapurV1A.1252s0010
N
TCM_018476
Theobroma cacao
TCM_018476
N
VIT_14s0108g00420
Vitis vinifera
VIT_14s0108g00420
N