CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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MhA1_Contig790.frz3.gene5
(
Meloidogyne hapla
)
Nuclear receptor
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00105 (zf-C4)
IPR001628
MhA1_Contig790.frz3.gene5
T309675_2.00
WormBase:ParaSite (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
MhA1_Contig790.frz3.gene5
Nuclear receptor
28
97
TKCCICGYICSGYIYYNVICCDGCKHFFRRCVNAKELYKCKNYGNCNVMNVAIKCKSCRFDKCILVGMVF
Links
Other
Nuclear receptor
family TFs
Other
Meloidogyne hapla
TFs
37 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
F775_08284
Aegilops tauschii
F775_08284
N
0.000
F775_08285
Aegilops tauschii
F775_08285
N
0.000
BRADI4G09190
Brachypodium distachyon
BRADI4G09190
N
0.000
BRADI4G09180
Brachypodium distachyon
BRADI4G09180
N
0.000
LPERR11G20420
Leersia perrieri
LPERR11G20420
N
0.000
OBART11G23680
Oryza barthii
OBART11G23680
N
0.000
OB11G28100
Oryza brachyantha
OB11G28100
N
0.000
ORGLA11G0190400
Oryza glaberrima
ORGLA11G0190400
N
0.000
OGLUM11G22840
Oryza glumaepatula
OGLUM11G22840
N
0.000
ONIVA11G23200
Oryza nivara
ONIVA11G23200
N
0.000
ORUFI11G25560
Oryza rufipogon
ORUFI11G25560
N
0.000
OS11G0705900
Oryza sativa
OS11G0705900
N
0.000
Pavir.J31658
Panicum virgatum
Pavir.J31658
N
0.000
Pavir.J39141
Panicum virgatum
Pavir.J39141
N
0.000
Si026116m.g
Setaria italica
Si026116m.g
N
0.000
Sb05g027785
Sorghum bicolor
Sb05g027785
N
0.000
Traes_4AL_977AF4963
Triticum aestivum
Traes_4AL_977AF4963
N
0.000
Traes_4AL_B2CACD56E
Triticum aestivum
Traes_4AL_B2CACD56E
N
0.000
Traes_4BS_2EA81743E1
Triticum aestivum
Traes_4BS_2EA81743E1
N
0.000
Traes_4BS_344A932261
Triticum aestivum
Traes_4BS_344A932261
N
0.000
Traes_4DS_050789E2A
Triticum aestivum
Traes_4DS_050789E2A
N
0.000
Traes_4DS_A5CD70F30
Triticum aestivum
Traes_4DS_A5CD70F30
N
0.000
Traes_4DS_C7C37A73D
Triticum aestivum
Traes_4DS_C7C37A73D
N
0.000
TRIUR3_21533
Triticum urartu
TRIUR3_21533
N
0.000
GRMZM2G073823
Zea mays
GRMZM2G073823
N
0.000