nOo.2.0.1.g03355 (Onchocerca ochengi)
Nuclear receptor

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00105 (zf-C4) IPR001628 nOo.2.0.1.g03355 T309857_2.00 WormBase:ParaSite (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
nhr-1
M00686_2.00 		Caenorhabditis elegans
ARTGATCA
TGATCAYT		 PBM
Narasimhan et al.(2015)
pTH9322 		0.867 0.614
For this family, TFs with SR scores > 0.745 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
nOo.2.0.1.t03355-RA Nuclear receptor 90 159

Links

Other Nuclear receptor family TFs
Other Onchocerca ochengi TFs

170 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
BRADI4G09197 Brachypodium distachyon BRADI4G09197 N
MLOC_74705 Hordeum vulgare MLOC_74705 N
LPERR11G20420 Leersia perrieri LPERR11G20420 N
OBART11G23660 Oryza barthii OBART11G23660 N
OBART11G23670 Oryza barthii OBART11G23670 N
ORGLA11G0190300 Oryza glaberrima ORGLA11G0190300 N
ORGLA11G0190200 Oryza glaberrima ORGLA11G0190200 N
BGIOSGA035742 Oryza indica BGIOSGA035742 N
BGIOSGA035741 Oryza indica BGIOSGA035741 N
ONIVA11G23190 Oryza nivara ONIVA11G23190 N
ORUFI11G25550 Oryza rufipogon ORUFI11G25550 N
OS11G0705200 Oryza sativa OS11G0705200 N
Pavir.Hb00044 Panicum virgatum Pavir.Hb00044 N
Si025985m.g Setaria italica Si025985m.g N
TRAES3BF026400020CFD_g Triticum aestivum TRAES3BF026400020CFD_g N
Traes_4AL_FF199F127 Triticum aestivum Traes_4AL_FF199F127 N
Traes_4DS_050789E2A Triticum aestivum Traes_4DS_050789E2A N
Traes_5DL_E275797CE Triticum aestivum Traes_5DL_E275797CE N
TRIUR3_21532 Triticum urartu TRIUR3_21532 N
GRMZM5G868355 Zea mays GRMZM5G868355 N