CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
scaffold665-EXSNAP2012.4
(
Pristionchus exspectatus
)
Nuclear receptor
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00105 (zf-C4)
IPR001628
scaffold665-EXSNAP2012.4
T310302_2.00
WormBase:ParaSite (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
scaffold665-EXSNAP2012.4
Nuclear receptor
16
85
IGCAVCGDKVNGTRYGVPACLGCIVFFRRAIIKNSQFNCQRNGRCEIDHKSRCTCRFCRLQKCLQVGMNP
Links
Other
Nuclear receptor
family TFs
Other
Pristionchus exspectatus
TFs
24 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
CBN04815
Caenorhabditis brenneri
CBN04815
N
0.753
CBN05437
Caenorhabditis brenneri
CBN05437
N
0.856
CBN12278
Caenorhabditis brenneri
CBN12278
N
0.926
CBN13714
Caenorhabditis brenneri
CBN13714
N
0.782
CBN13717
Caenorhabditis brenneri
CBN13717
N
0.785
CBG10365
Caenorhabditis briggsae
CBG10365
N
0.913
CBG11459
Caenorhabditis briggsae
CBG11459
N
0.763
CBG13579
Caenorhabditis briggsae
CBG13579
N
0.925
CBG06579
Caenorhabditis briggsae
CBG06579
N
0.869
nhr-262
Caenorhabditis elegans
WBGene00008619
N
0.748
nhr-260
Caenorhabditis elegans
WBGene00016517
N
0.866
nhr-181
Caenorhabditis elegans
WBGene00018189
N
0.921
nhr-274
Caenorhabditis elegans
WBGene00021522
N
0.924
CJA01109
Caenorhabditis japonica
CJA01109
N
0.924
CJA43179
Caenorhabditis japonica
CJA43179
N
0.848
CJA17398
Caenorhabditis japonica
CJA17398
N
0.935
CRE02503
Caenorhabditis remanei
CRE02503
N
0.790
CRE28929
Caenorhabditis remanei
CRE28929
N
0.819
CRE13698
Caenorhabditis remanei
CRE13698
N
0.924
CRE09477
Caenorhabditis remanei
CRE09477
N
0.790
CRE09284
Caenorhabditis remanei
CRE09284
N
0.921
CRE09282
Caenorhabditis remanei
CRE09282
N
0.884
CRE05426
Caenorhabditis remanei
CRE05426
N
0.832
Hba_13467
Heterorhabditis bacteriophora
Hba_13467
N
0.948