CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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scaffold665-EXSNAP2012.4
(
Pristionchus exspectatus
)
Nuclear receptor
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00105 (zf-C4)
IPR001628
scaffold665-EXSNAP2012.4
T310302_2.00
WormBase:ParaSite (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
scaffold665-EXSNAP2012.4
Nuclear receptor
16
85
IGCAVCGDKVNGTRYGVPACLGCIVFFRRAIIKNSQFNCQRNGRCEIDHKSRCTCRFCRLQKCLQVGMNP
Links
Other
Nuclear receptor
family TFs
Other
Pristionchus exspectatus
TFs
24 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Hba_13467
Heterorhabditis bacteriophora
Hba_13467
N
0.948
CJA17398
Caenorhabditis japonica
CJA17398
N
0.935
CBN12278
Caenorhabditis brenneri
CBN12278
N
0.926
CBG13579
Caenorhabditis briggsae
CBG13579
N
0.925
CJA01109
Caenorhabditis japonica
CJA01109
N
0.924
CRE13698
Caenorhabditis remanei
CRE13698
N
0.924
nhr-274
Caenorhabditis elegans
WBGene00021522
N
0.924
CRE09284
Caenorhabditis remanei
CRE09284
N
0.921
nhr-181
Caenorhabditis elegans
WBGene00018189
N
0.921
CBG10365
Caenorhabditis briggsae
CBG10365
N
0.913
CRE09282
Caenorhabditis remanei
CRE09282
N
0.884
CBG06579
Caenorhabditis briggsae
CBG06579
N
0.869
nhr-260
Caenorhabditis elegans
WBGene00016517
N
0.866
CBN05437
Caenorhabditis brenneri
CBN05437
N
0.856
CJA43179
Caenorhabditis japonica
CJA43179
N
0.848
CRE05426
Caenorhabditis remanei
CRE05426
N
0.832
CRE28929
Caenorhabditis remanei
CRE28929
N
0.819
CRE02503
Caenorhabditis remanei
CRE02503
N
0.790
CRE09477
Caenorhabditis remanei
CRE09477
N
0.790
CBN13717
Caenorhabditis brenneri
CBN13717
N
0.785
CBN13714
Caenorhabditis brenneri
CBN13714
N
0.782
CBG11459
Caenorhabditis briggsae
CBG11459
N
0.763
CBN04815
Caenorhabditis brenneri
CBN04815
N
0.753
nhr-262
Caenorhabditis elegans
WBGene00008619
N
0.748