CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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nhr-260
(
Caenorhabditis elegans
)
Nuclear receptor
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00105 (zf-C4)
IPR001628
WBGene00016517
T306330_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
C38C3.9
Nuclear receptor
39
108
ERCKVCEDRSNNSRYGAPACLGCTVFFRRAVVNKMQYRCLREQKCLISFTYRCACRYCRFQKCLNVGMRP
Links
Other
Nuclear receptor
family TFs
Other
Caenorhabditis elegans
TFs
21 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
CBG06579
Caenorhabditis briggsae
CBG06579
N
0.988
CBN05437
Caenorhabditis brenneri
CBN05437
N
0.980
nhr-262
Caenorhabditis elegans
WBGene00008619
N
0.977
CBN09493
Caenorhabditis brenneri
CBN09493
N
0.969
CRE02503
Caenorhabditis remanei
CRE02503
N
0.961
CRE09477
Caenorhabditis remanei
CRE09477
N
0.961
CJA17398
Caenorhabditis japonica
CJA17398
N
0.943
CBG04944
Caenorhabditis briggsae
CBG04944
N
0.933
CBN12278
Caenorhabditis brenneri
CBN12278
N
0.908
CBG13579
Caenorhabditis briggsae
CBG13579
N
0.906
CJA01109
Caenorhabditis japonica
CJA01109
N
0.904
CRE13698
Caenorhabditis remanei
CRE13698
N
0.904
nhr-274
Caenorhabditis elegans
WBGene00021522
N
0.904
Hba_13467
Heterorhabditis bacteriophora
Hba_13467
N
0.871
scaffold665-EXSNAP2012.4
Pristionchus exspectatus
scaffold665-EXSNAP2012.4
N
0.866
CRE09282
Caenorhabditis remanei
CRE09282
N
0.859
CBG10390
Caenorhabditis briggsae
CBG10390
N
0.803
CBG10365
Caenorhabditis briggsae
CBG10365
N
0.763
CRE09284
Caenorhabditis remanei
CRE09284
N
0.763
nhr-181
Caenorhabditis elegans
WBGene00018189
N
0.763
CBN13714
Caenorhabditis brenneri
CBN13714
N
0.762