tp53 (Danio rerio)
p53

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00870 (P53) IPR011615 ENSDARG00000035559 T311017_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
Trp53
M03439_2.00 		Mus musculus
ACWTGYYNHHDSACWTGT
ACAWGTSHDDNRRCAWGT		 SELEX
Jolma et al.(2013)
Tp53_1 		0.723 0.723
Trp53
M03440_2.00 		Mus musculus
ACWTGTYHNNGACWTGT
ACAWGTCNNDRACAWGT		 SELEX
Jolma et al.(2013)
Tp53_2 		0.723 0.723
Trp53
M03441_2.00 		Mus musculus
RACATGYCYRGRCATGTY
RACATGYCYRGRCATGTY		 SELEX
Jolma et al.(2013)
Tp53_3 		0.723 0.723
Trp53
M09340_2.00 		Mus musculus
RRRCAWGYCCRGRCADGYMH
DKRCHTGYCYGGRCWTGYYY		 Misc
Kulakovskiy et al.(2013)
P53_MOUSE.H11MO.0.A 		0.723 0.723
TP53
M09337_2.00 		Homo sapiens
DRRCWTGYYCAGRCATGYYY
RRRCATGYCTGRRCAWGYYH		 Misc
Kulakovskiy et al.(2013)
P53_HUMAN.H11MO.0.A 		0.708 0.708
TP53
M09621_2.00 		Homo sapiens
NNDRCAWGYHNNDRCWWGYH
DRCWWGYHNNDRCWTGYHNN		 Misc
Heinz et al.(2010)
Saos-p53 		0.708 0.708
TP53
M11197_2.00 		Homo sapiens
RGACATGCCCGGGCATGTYC
GRACATGCCCGGGCATGTCY		 Transfac
Matys et al.(2006)
V$P53_01 		0.708 0.708
TP53
M11198_2.00 		Homo sapiens
NGRCWTGYYY
RRRCAWGYCN		 Transfac
Matys et al.(2006)
V$P53_02 		0.708 0.708
TP53
M11199_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$P53_03 		0.708 0.708
TP53
M11200_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$P53_04 		0.708 0.708
TP53
M11201_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$P53_05 		0.708 0.708
TP53
M11202_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$P53_Q3_01 		0.708 0.708
TP53
M11203_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$P53_Q3 		0.708 0.708
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSDARP00000051548 p53 64 258
ENSDARP00000116736 p53 63 257

Links

Other p53 family TFs
Other Danio rerio TFs

47 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ENSAMEG00000016851 Ailuropoda melanoleuca ENSAMEG00000016851 I 0.728
Alligator_sinensis_CCG007355.2 Alligator sinensis Alligator_sinensis_CCG007355.2 N 0.709
ENSACAG00000022533 Anolis carolinensis ENSACAG00000022533 I 0.769
ENSBTAP00000001420-D1 Bos grunniens ENSBTAP00000001420-D1 I 0.723
TP53 Bos taurus ENSBTAG00000001069 I 0.724
TP53 Callithrix jacchus ENSCJAG00000014978 I 0.713
TP53 Canis familiaris ENSCAFG00000016714 I 0.718
TP53 Cavia porcellus ENSCPOG00000014252 I 0.708
Cmyd_10000491 Chelonia mydas Cmyd_10000491 I 0.754
ENSCSAG00000011345 Chlorocebus sabaeus ENSCSAG00000011345 I 0.723
TP53 Dasypus novemcinctus ENSDNOG00000005252 I 0.724
TP53 Erinaceus europaeus ENSEEUG00000014573 I 0.728
TP53 Felis catus ENSFCAG00000009623 I 0.714
TP53 Gorilla gorilla ENSGGOG00000009786 I 0.708
TP53 Homo sapiens ENSG00000141510 D 0.713
ENSSTOG00000022774 Ictidomys tridecemlineatus ENSSTOG00000022774 I 0.738
ENSLACG00000014014 Latimeria chalumnae ENSLACG00000014014 N 0.740
ENSLOCG00000013832 Lepisosteus oculatus ENSLOCG00000013832 N 0.781
ENSLAFG00000007483 Loxodonta africana ENSLAFG00000007483 I 0.709
ENSP00000269305 Macaca fascicularis ENSP00000269305 I 0.723
TP53 Macaca mulatta ENSMMUG00000008639 I 0.723
ENSMEUG00000013135 Macropus eugenii ENSMEUG00000013135 I 0.744
TP53 Microcebus murinus ENSMICG00000014853 I 0.703
ENSMPUG00000009017 Mustela putorius furo ENSMPUG00000009017 I 0.714
Trp53 Mus musculus ENSMUSG00000059552 D 0.723
Myotis_brandtii_TP53_10021059 Myotis brandtii Myotis_brandtii_TP53_10021059 I 0.713
ENSMLUG00000006411 Myotis lucifugus ENSMLUG00000006411 I 0.713
TP53 Ochotona princeps ENSOPRG00000006441 I 0.727
ENSONIG00000018962 Oreochromis niloticus ENSONIG00000018962 N 0.719
ENSOCUG00000001138 Oryctolagus cuniculus ENSOCUG00000001138 I 0.733
TP53 Otolemur garnettii ENSOGAG00000016871 I 0.703
ENSOARG00000015571 Ovis aries ENSOARG00000015571 I 0.728
TP53 Pan troglodytes ENSPTRG00000008703 I 0.708
ENSPANG00000024061 Papio anubis ENSPANG00000024061 I 0.723
ENSPSIG00000013302 Pelodiscus sinensis ENSPSIG00000013302 I 0.754
Pvit_02042 Pogona vitticeps Pvit_02042 N 0.718
ENSPPYG00000007934 Pongo abelii ENSPPYG00000007934 I 0.713
TP53 Procavia capensis ENSPCAG00000012725 I 0.738
Tp53 Rattus norvegicus ENSRNOG00000010756 I 0.708
LOC100910954 Rattus norvegicus ENSRNOG00000046657 I 0.710
ENSSHAG00000015510 Sarcophilus harrisii ENSSHAG00000015510 I 0.754
TP53 Sorex araneus ENSSARG00000006206 I 0.713
TP53 Sus scrofa ENSSSCG00000017950 I 0.718
TP53 Tursiops truncatus ENSTTRG00000010250 I 0.719
tp53.L Xenopus laevis XB-GENE-6252168 N 0.723
tp53 Xenopus tropicalis XB-GENE-484286 N 0.730