ENSLAFG00000028692 (Loxodonta africana)
p53

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00870 (P53) IPR011615 ENSLAFG00000028692 T311064_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
TP53
M09337_2.00 		Homo sapiens
DRRCWTGYYCAGRCATGYYY
RRRCATGYCTGRRCAWGYYH		 Misc
Kulakovskiy et al.(2013)
P53_HUMAN.H11MO.0.A 		0.750 0.750
TP53
M09621_2.00 		Homo sapiens
NNDRCAWGYHNNDRCWWGYH
DRCWWGYHNNDRCWTGYHNN		 Misc
Heinz et al.(2010)
Saos-p53 		0.750 0.750
TP53
M11197_2.00 		Homo sapiens
RGACATGCCCGGGCATGTYC
GRACATGCCCGGGCATGTCY		 Transfac
Matys et al.(2006)
V$P53_01 		0.750 0.750
TP53
M11198_2.00 		Homo sapiens
NGRCWTGYYY
RRRCAWGYCN		 Transfac
Matys et al.(2006)
V$P53_02 		0.750 0.750
TP53
M11199_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$P53_03 		0.750 0.750
TP53
M11200_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$P53_04 		0.750 0.750
TP53
M11201_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$P53_05 		0.750 0.750
TP53
M11202_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$P53_Q3_01 		0.750 0.750
TP53
M11203_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$P53_Q3 		0.750 0.750
Trp53
M03439_2.00 		Mus musculus
ACWTGYYNHHDSACWTGT
ACAWGTSHDDNRRCAWGT		 SELEX
Jolma et al.(2013)
Tp53_1 		0.707 0.707
Trp53
M03440_2.00 		Mus musculus
ACWTGTYHNNGACWTGT
ACAWGTCNNDRACAWGT		 SELEX
Jolma et al.(2013)
Tp53_2 		0.707 0.707
Trp53
M03441_2.00 		Mus musculus
RACATGYCYRGRCATGTY
RACATGYCYRGRCATGTY		 SELEX
Jolma et al.(2013)
Tp53_3 		0.707 0.707
Trp53
M09340_2.00 		Mus musculus
RRRCAWGYCCRGRCADGYMH
DKRCHTGYCYGGRCWTGYYY		 Misc
Kulakovskiy et al.(2013)
P53_MOUSE.H11MO.0.A 		0.707 0.707
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSLAFP00000023554 p53 79 262

Links

Other p53 family TFs
Other Loxodonta africana TFs

22 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
AMTR_s00009p00241540 Amborella trichopoda AMTR_s00009p00241540 N 0.000
emb2746 Arabidopsis thaliana AT5G63420 N 0.000
Bostr.0568s0468 Boechera stricta Bostr.0568s0468 N 0.000
Bo3g103450 Brassica oleracea Bo3g103450 N 0.000
Cagra.0248s0020 Capsella grandiflora Cagra.0248s0020 N 0.000
Carubv10027519m.g Capsella rubella Carubv10027519m.g N 0.000
Cla019560 Citrullus lanatus Cla019560 N 0.000
Ciclev10018763m.g Citrus clementina Ciclev10018763m.g N 0.000
orange1.1g040954m.g Citrus sinensis orange1.1g040954m.g N 0.000
orange1.1g016319m.g Citrus sinensis orange1.1g016319m.g N 0.000
Cucsa.157420 Cucumis sativus Cucsa.157420 N 0.000
Thhalv10003624m.g Eutrema salsugineum Thhalv10003624m.g N 0.000
gene06358-v1.0-hybrid Fragaria vesca gene06358-v1.0-hybrid N 0.000
gene06360-v1.0-hybrid Fragaria vesca gene06360-v1.0-hybrid N 0.000
GLYMA17G13780 Glycine max GLYMA17G13780 N 0.000
Gorai.001G059600 Gossypium raimondii Gorai.001G059600 N 0.000
Lus10016758.g Linum usitatissimum Lus10016758.g N 0.000
MDP0000313526 Malus domestica MDP0000313526 N 0.000
MDP0000574910 Malus domestica MDP0000574910 N 0.000
mgf010338m Mimulus guttatus mgf010338m N 0.000
POPTR_0012s09780 Populus trichocarpa POPTR_0012s09780 N 0.000
Pm024489 Prunus mume Pm024489 N 0.000
PRUPE_ppa001238mg Prunus persica PRUPE_ppa001238mg N 0.000
SapurV1A.0168s0020 Salix purpurea SapurV1A.0168s0020 N 0.000
SapurV1A.0841s0060 Salix purpurea SapurV1A.0841s0060 N 0.000
emb2746 Vitis vinifera VIT_17s0000g01640 N 0.000