CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Ppa-rps-13
(
Pristionchus pacificus
)
Paired box
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00292 (PAX)
IPR001523
PPA24697
T312036_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
PPA24697
Paired box
27
86
KLSGDDVTEQICKLAKKGLRPSQIGVILRDSHGVAQIRRVTGNKIVRILKAKGMAPEIPE
Links
Other
Paired box
family TFs
Other
Pristionchus pacificus
TFs
3 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
OBART12G09450
Oryza barthii
OBART12G09450
N
0.000
OBART12G09480
Oryza barthii
OBART12G09480
N
0.000
ORGLA06G0135200
Oryza glaberrima
ORGLA06G0135200
N
0.000
ORGLA12G0089600
Oryza glaberrima
ORGLA12G0089600
N
0.000
ORGLA12G0089800
Oryza glaberrima
ORGLA12G0089800
N
0.000
OGLUM06G17270
Oryza glumaepatula
OGLUM06G17270
N
0.000
OGLUM06G17310
Oryza glumaepatula
OGLUM06G17310
N
0.000
OGLUM12G10670
Oryza glumaepatula
OGLUM12G10670
N
0.000
OGLUM12G10680
Oryza glumaepatula
OGLUM12G10680
N
0.000
BGIOSGA036334
Oryza indica
BGIOSGA036334
N
0.000
BGIOSGA018453
Oryza indica
BGIOSGA018453
N
0.000
OLONG_018852
Oryza longistaminata
OLONG_018852
N
0.000
OLONG_012664
Oryza longistaminata
OLONG_012664
N
0.000
OLONG_012662
Oryza longistaminata
OLONG_012662
N
0.000
OMERI06G17150
Oryza meridionalis
OMERI06G17150
N
0.000
OMERI06G17180
Oryza meridionalis
OMERI06G17180
N
0.000
ONIVA12G01580
Oryza nivara
ONIVA12G01580
N
0.000
ONIVA12G01620
Oryza nivara
ONIVA12G01620
N
0.000
ONIVA06G15740
Oryza nivara
ONIVA06G15740
N
0.000
OPUNC06G14730
Oryza punctata
OPUNC06G14730
N
0.000
OPUNC12G08600
Oryza punctata
OPUNC12G08600
N
0.000
OPUNC06G14680
Oryza punctata
OPUNC06G14680
N
0.000
ORUFI06G17170
Oryza rufipogon
ORUFI06G17170
N
0.000
ORUFI12G10490
Oryza rufipogon
ORUFI12G10490
N
0.000
ORUFI12G10530
Oryza rufipogon
ORUFI12G10530
N
0.000
OS06G0504100
Oryza sativa
OS06G0504100
N
0.000
OS12G0407000
Oryza sativa
OS12G0407000
N
0.000
Traes_4BL_9A17EA3B7
Triticum aestivum
Traes_4BL_9A17EA3B7
I
0.000