Cflo_06473--XP_394848.3_APIME (Camponotus floridanus)
Paired box

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00292 (PAX) IPR001523 Cflo_06473--XP_394848.3_APIME T312146_2.00 GigaDB (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
PAX7
M00346_2.00 		Homo sapiens
NGTYAYGSHN
NDSCRTRACN		 PBM
Barrera et al.(2016)
PAX7_REF 		0.836 0.836
PAX7
M00345_2.00 		Homo sapiens
NSGTCACGSN
NSCGTGACSN		 PBM
Barrera et al.(2016)
PAX7_P112L 		0.828 0.828
Poxm
M03944_2.00 		Drosophila melanogaster
CAVTCAWGCGTGACR
YGTCACGCWTGABTG		 SELEX
Nitta et al.(2015)
Poxm_1 		0.713 0.713
Poxm
M03945_2.00 		Drosophila melanogaster
NYSAWGCRTRACS
SGTYAYGCWTSRN		 SELEX
Nitta et al.(2015)
Poxm_2 		0.713 0.713
Poxm
M06436_2.00 		Drosophila melanogaster
NNNNNNMVNHNRNSCRTGA
TCAYGSNYNDNBKNNNNNN		 B1H
Zhu et al.(2011)
Poxm_SOLEXA_5_FBgn0003129 		0.713 0.713
pax2
M02428_2.00 		Xenopus tropicalis
NNNRNBCRNN
NNYGVNYNNN		 PBM
Weirauch et al.(2014)
pTH8556 		0.705 0.705
PAX1
M03442_2.00 		Homo sapiens
DBCANTSAWGCGTGACS
SGTCACGCWTSANTGVH		 SELEX
Jolma et al.(2013)
PAX1_1 		0.705 0.705
PAX9
M03444_2.00 		Homo sapiens
NKCANTSAWGCGTGACS
SGTCACGCWTSANTGMN		 SELEX
Jolma et al.(2013)
PAX9_1 		0.705 0.705
PAX1
M05687_2.00 		Homo sapiens
BCRNTSRWGCGTGACSN
NSGTCACGCWYSANYGV		 SELEX
Yin et al.(2017)
PAX1_eDBD_HT-SELEX 		0.705 0.705
PAX9
M05689_2.00 		Homo sapiens
BHRNYSRDSCGTRACSN
NSGTYACGSHYSRNYDV		 SELEX
Yin et al.(2017)
PAX9_eDBD_HT-SELEX 		0.705 0.705
PAX1
M11207_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$PAX1_B 		0.705 0.705
pax9
M11204_2.00 		Danio rerio Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$PAX9_B 		0.705 0.705
PAX1
M05688_2.00 		Homo sapiens
BCRNTSAWGCGTGACSN
NSGTCACGCWTSANYGV		 SELEX
Yin et al.(2017)
PAX1_eDBD_Methyl-HT-SELEX 		0.705 0.705
PAX9
M05690_2.00 		Homo sapiens
BCRNTSAWSCGYGACNN
NNGTCRCGSWTSANYGV		 SELEX
Yin et al.(2017)
PAX9_eDBD_Methyl-HT-SELEX 		0.705 0.705
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Cflo_06473--XP_394848.3_APIME Paired box 18 139

Links

Other Paired box family TFs
Other Camponotus floridanus TFs

182 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ENSAMEG00000002906 Ailuropoda melanoleuca ENSAMEG00000002906 I 0.705
ENSAMEG00000012642 Ailuropoda melanoleuca ENSAMEG00000012642 I 0.705
Alligator_sinensis_CCG004503.1 Alligator sinensis Alligator_sinensis_CCG004503.1 I 0.705
Alligator_sinensis_CCG006492.1 Alligator sinensis Alligator_sinensis_CCG006492.1 I 0.836
Alligator_sinensis_CCG007145.1 Alligator sinensis Alligator_sinensis_CCG007145.1 I 0.800
Alligator_sinensis_CCG007145.2 Alligator sinensis Alligator_sinensis_CCG007145.2 I 0.748
ENSAPLG00000012856 Anas platyrhynchos ENSAPLG00000012856 I 0.705
ENSACAG00000001481 Anolis carolinensis ENSACAG00000001481 I 0.705
ENSACAG00000010563 Anolis carolinensis ENSACAG00000010563 I 0.705
AALB001246 Anopheles albimanus AALB001246 N 0.733
ACHR005005 Anopheles christyi ACHR005005 I 0.873
ACUA026425 Anopheles culicifacies ACUA026425 I 0.847
ADIR009743 Anopheles dirus ADIR009743 N 0.725
AFAF004706 Anopheles farauti AFAF004706 I 0.803
AFUN002668 Anopheles funestus AFUN002668 I 0.795
AMAM016481 Anopheles maculatus AMAM016481 I 0.746
AMIN006553 Anopheles minimus AMIN006553 I 0.847
Afo_R004464 Aptenodytes forsteri Afo_R004464 I 0.705
ALUE_0000098101 Ascaris lumbricoides ALUE_0000098101 I 0.757
ALUE_0001653201 Ascaris lumbricoides ALUE_0001653201 I 0.757
ENSAMXG00000002161 Astyanax mexicanus ENSAMXG00000002161 I 0.705
ACEP15304 Atta cephalotes ACEP15304 I 0.893
ACEP15310 Atta cephalotes ACEP15310 I 0.925
ENSBTAP00000008861-D1 Bos grunniens ENSBTAP00000008861-D1 I 0.705
ENSP00000384817-D1 Bos grunniens ENSP00000384817-D1 I 0.705
PAX1 Bos taurus ENSBTAG00000006742 I 0.705
PAX9 Bos taurus ENSBTAG00000009186 I 0.705
estExt_fgenesh2_pg.C_420056 Branchiostoma floridae estExt_fgenesh2_pg.C_420056 I 0.721
PAX3 Callithrix jacchus ENSCJAG00000012088 I 0.800
PAX1 Callithrix jacchus ENSCJAG00000005773 I 0.705
PAX9 Callithrix jacchus ENSCJAG00000016460 I 0.705
Aan_R005718 Calypte anna Aan_R005718 I 0.705
PAX1 Canis familiaris ENSCAFG00000005170 I 0.705
PAX9 Canis familiaris ENSCAFG00000013690 I 0.705
PAX1 Cavia porcellus ENSCPOG00000002886 I 0.705
PAX9 Cavia porcellus ENSCPOG00000010951 I 0.705
Cmyd_10010530 Chelonia mydas Cmyd_10010530 I 0.800
ENSCSAG00000011068 Chlorocebus sabaeus ENSCSAG00000011068 I 0.705
ENSCSAG00000015463 Chlorocebus sabaeus ENSCSAG00000015463 I 0.705
CLEC009745 Cimex lectularius CLEC009745 I 0.919
CLEC012019 Cimex lectularius CLEC012019 I 0.721
CGI_10005222 Crassostrea gigas CGI_10005222 I 0.704
CpipJ_CPIJ006494 Culex pipiens CpipJ_CPIJ006494 I 0.831
CpipJ_CPIJ009206 Culex pipiens CpipJ_CPIJ009206 I 0.707
CpipJ_CPIJ019791 Culex pipiens CpipJ_CPIJ019791 I 0.833
CPIJ006494 Culex quinquefasciatus CPIJ006494 I 0.831
CPIJ009206 Culex quinquefasciatus CPIJ009206 I 0.707
CPIJ019791 Culex quinquefasciatus CPIJ019791 I 0.833
KGM_02686 Danaus plexippus KGM_02686 I 0.903
pax6a Danio rerio ENSDARG00000103379 I 0.700
pax1a Danio rerio ENSDARG00000008203 I 0.705
pax8 Danio rerio ENSDARG00000015879 I 0.705
pax2a Danio rerio ENSDARG00000028148 I 0.705
pax9 Danio rerio ENSDARG00000053829 D 0.705
DAPPUDRAFT_307722 Daphnia pulex DAPPUDRAFT_307722 I 0.713
DAPPUDRAFT_7942 Daphnia pulex DAPPUDRAFT_7942 I 0.744
PAX9 Dasypus novemcinctus ENSDNOG00000000352 I 0.705
PAX1 Dasypus novemcinctus ENSDNOG00000033546 I 0.705
YQE_12759 Dendroctonus ponderosae YQE_12759 N 0.705
Pax7 Dipodomys ordii ENSDORG00000011854 I 0.836
Pax1 Dipodomys ordii ENSDORG00000016051 I 0.705
GL14130 Drosophila persimilis FBgn0151735 I 0.824
PAX9 Echinops telfairi ENSETEG00000002086 I 0.705
PAX9 Equus caballus ENSECAG00000023712 I 0.705
PAX1 Erinaceus europaeus ENSEEUG00000007846 I 0.705
PAX9 Felis catus ENSFCAG00000001024 I 0.705
PAX1 Felis catus ENSFCAG00000004293 I 0.705
ENSFALG00000006155 Ficedula albicollis ENSFALG00000006155 I 0.705
ENSGMOG00000003366 Gadus morhua ENSGMOG00000003366 I 0.840
ENSGMOG00000009128 Gadus morhua ENSGMOG00000009128 I 0.705
PAX9 Gallus gallus ENSGALG00000010114 I 0.705
ENSGALG00000028576 Gallus gallus ENSGALG00000028576 I 0.705
pax1a Gasterosteus aculeatus ENSGACG00000006987 I 0.713
pax9 Gasterosteus aculeatus ENSGACG00000011298 I 0.705
PAX9 Gorilla gorilla ENSGGOG00000001528 I 0.705
PAX1 Gorilla gorilla ENSGGOG00000016075 I 0.705
HHAL001219-PA Halyomorpha halys HHAL001219-PA I 0.919
HHAL005838-PA Halyomorpha halys HHAL005838-PA I 0.719
HPBE_0000479901 Heligmosomoides bakeri HPBE_0000479901 I 0.725
PAX7 Homo sapiens ENSG00000009709 D 0.836
PAX3 Homo sapiens ENSG00000135903 D 0.800
PAX1 Homo sapiens ENSG00000125813 D 0.705
PAX9 Homo sapiens ENSG00000198807 D 0.705
ENSSTOG00000003000 Ictidomys tridecemlineatus ENSSTOG00000003000 I 0.705
ENSSTOG00000015730 Ictidomys tridecemlineatus ENSSTOG00000015730 I 0.705
ISCW003096 Ixodes scapularis ISCW003096 I 0.931
ISCW011634 Ixodes scapularis ISCW011634 I 0.712
ENSLOCG00000013992 Lepisosteus oculatus ENSLOCG00000013992 I 0.705
LotgiG161614 Lottia gigantea LotgiG161614 I 0.721
PAX9 Loxodonta africana ENSLAFG00000017541 I 0.705
LCUP011796 Lucilia cuprina LCUP011796 I 0.817
ENSP00000355245 Macaca fascicularis ENSP00000355245 I 0.705
ENSP00000381499 Macaca fascicularis ENSP00000381499 I 0.705
PAX3 Macaca mulatta ENSMMUG00000020409 I 0.800
PAX9 Macaca mulatta ENSMMUG00000009648 I 0.705
PAX1 Macaca mulatta ENSMMUG00000019409 I 0.705
ENSMEUG00000002095 Macropus eugenii ENSMEUG00000002095 I 0.705
ENSMEUG00000010140 Macropus eugenii ENSMEUG00000010140 I 0.705
ENSMEUG00000011758 Macropus eugenii ENSMEUG00000011758 I 0.727
PAX9 Microcebus murinus ENSMICG00000010808 I 0.705
PAX1 Monodelphis domestica ENSMODG00000006198 I 0.705
PAX9 Monodelphis domestica ENSMODG00000012681 I 0.705
ENSMODG00000025571 Monodelphis domestica ENSMODG00000025571 I 0.836
MDOA001030 Musca domestica MDOA001030 I 0.713
ENSMPUG00000001187 Mustela putorius furo ENSMPUG00000001187 I 0.705
ENSMPUG00000016259 Mustela putorius furo ENSMPUG00000016259 I 0.705
Pax9 Mus musculus ENSMUSG00000001497 I 0.705
Pax1 Mus musculus ENSMUSG00000037034 I 0.705
PAX9 Myotis lucifugus ENSMLUG00000011407 I 0.705
PAX1 Myotis lucifugus ENSMLUG00000014710 I 0.705
ENSNLEG00000003346 Nomascus leucogenys ENSNLEG00000003346 I 0.705
ENSNLEG00000010049 Nomascus leucogenys ENSNLEG00000010049 I 0.705
PAX1 Ochotona princeps ENSOPRG00000017249 I 0.705
OESDEN_18680 Oesophagostomum dentatum OESDEN_18680 I 0.750
SNAPOd2T00016386001 Oikopleura dioica SNAPOd2T00016386001 I 0.833
OFLC_0000380401 Onchocerca flexuosa OFLC_0000380401 I 0.791
Ogr06456 Ophisaurus gracilis Ogr06456 I 0.762
Ogr15337 Ophisaurus gracilis Ogr15337 I 0.727
Ogr19508 Ophisaurus gracilis Ogr19508 I 0.705
ENSONIG00000000990 Oreochromis niloticus ENSONIG00000000990 I 0.705
ENSONIG00000008137 Oreochromis niloticus ENSONIG00000008137 I 0.713
PAX1 Ornithorhynchus anatinus ENSOANG00000002008 I 0.705
PAX9 Ornithorhynchus anatinus ENSOANG00000014065 I 0.705
PAX1 Oryctolagus cuniculus ENSOCUG00000003276 I 0.705
pax1 Oryzias latipes ENSORLG00000017412 I 0.713
ENSORLG00000019389 Oryzias latipes ENSORLG00000019389 I 0.820
ENSOGAG00000013131 Otolemur garnettii ENSOGAG00000013131 I 0.705
PAX1 Otolemur garnettii ENSOGAG00000033162 I 0.705
ENSOARG00000004951 Ovis aries ENSOARG00000004951 I 0.705
ENSOARG00000008050 Ovis aries ENSOARG00000008050 I 0.705
PAX9 Pan troglodytes ENSPTRG00000006281 I 0.705
PAX1 Pan troglodytes ENSPTRG00000013311 I 0.705
ENSPANG00000000932 Papio anubis ENSPANG00000000932 I 0.705
ENSPANG00000008282 Papio anubis ENSPANG00000008282 I 0.705
PEQ_0000701201 Parascaris equorum PEQ_0000701201 I 0.817
ENSPSIG00000010961 Pelodiscus sinensis ENSPSIG00000010961 I 0.705
ENSPMAG00000010414 Petromyzon marinus ENSPMAG00000010414 I 0.721
ENSPFOG00000003208 Poecilia formosa ENSPFOG00000003208 I 0.713
ENSPFOG00000017550 Poecilia formosa ENSPFOG00000017550 I 0.705
Pvit_17942 Pogona vitticeps Pvit_17942 I 0.705
ENSPPYG00000005755 Pongo abelii ENSPPYG00000005755 I 0.705
ENSPPYG00000010758 Pongo abelii ENSPPYG00000010758 I 0.705
PAX1 Procavia capensis ENSPCAG00000003556 I 0.705
PAX7 Procavia capensis ENSPCAG00000005303 I 0.836
PAX9 Pteropus vampyrus ENSPVAG00000003728 I 0.727
Pax9 Rattus norvegicus ENSRNOG00000008826 I 0.705
Pax5 Rattus norvegicus ENSRNOG00000024729 I 0.705
RPRC001180 Rhodnius prolixus RPRC001180 I 0.856
RPRC008887 Rhodnius prolixus RPRC008887 I 0.888
ENSSHAG00000005531 Sarcophilus harrisii ENSSHAG00000005531 I 0.705
ENSSHAG00000017556 Sarcophilus harrisii ENSSHAG00000017556 I 0.705
Sjc_0077510 Schistosoma japonicum Sjc_0077510 I 0.714
SMTD_0001918101 Schistosoma mattheei SMTD_0001918101 I 0.742
SROB_0000822501 Schistosoma rodhaini SROB_0000822501 I 0.758
SBAD_0001213701 Soboliphyme baturini SBAD_0001213701 I 0.732
SINV15897 Solenopsis invicta SINV15897 I 0.981
PAX9 Sorex araneus ENSSARG00000000337 I 0.705
SMAR007866 Strigamia maritima SMAR007866 I 0.704
SMAR008441 Strigamia maritima SMAR008441 I 0.872
SMAR015380 Strigamia maritima SMAR015380 I 0.880
SPU_006683 Strongylocentrotus purpuratus SPU_006683 I 0.712
ENSSSCG00000001943 Sus scrofa ENSSSCG00000001943 I 0.705
PAX1 Sus scrofa ENSSSCG00000007112 I 0.705
PAX9 Taeniopygia guttata ENSTGUG00000012015 I 0.705
ENSTRUG00000007849 Takifugu rubripes ENSTRUG00000007849 I 0.840
pax1a Takifugu rubripes ENSTRUG00000008079 I 0.713
pax9 Takifugu rubripes ENSTRUG00000011965 I 0.705
ENSTSYG00000008085 Tarsius syrichta ENSTSYG00000008085 I 0.745
ENSTNIG00000005618 Tetraodon nigroviridis ENSTNIG00000005618 I 0.840
ENSTNIG00000013141 Tetraodon nigroviridis ENSTNIG00000013141 I 0.702
pax1a Tetraodon nigroviridis ENSTNIG00000016891 I 0.713
pax9 Tetraodon nigroviridis ENSTNIG00000019284 I 0.705
PAX9 Tupaia belangeri ENSTBEG00000002460 I 0.705
PAX5 Tupaia belangeri ENSTBEG00000007983 I 0.745
PAX1 Tursiops truncatus ENSTTRG00000002444 I 0.705
PAX5 Tursiops truncatus ENSTTRG00000006049 I 0.745
PAX8 Vicugna pacos ENSVPAG00000003973 I 0.704
pax9.L Xenopus laevis XB-GENE-864845 I 0.705
pax9 Xenopus tropicalis XB-GENE-482238 I 0.705
pax1 Xenopus tropicalis XB-GENE-487951 I 0.705
ENSXMAG00000015762 Xiphophorus maculatus ENSXMAG00000015762 I 0.705
ENSXMAG00000019114 Xiphophorus maculatus ENSXMAG00000019114 I 0.713