HPBE_0001739601 (Heligmosomoides bakeri)
Paired box

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00292 (PAX) IPR001523 HPBE_0001739601 T312710_2.00 WormBase:ParaSite (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
Poxm
M03944_2.00 		Drosophila melanogaster
CAVTCAWGCGTGACR
YGTCACGCWTGABTG		 SELEX
Nitta et al.(2015)
Poxm_1 		0.776 0.776
Poxm
M03945_2.00 		Drosophila melanogaster
NYSAWGCRTRACS
SGTYAYGCWTSRN		 SELEX
Nitta et al.(2015)
Poxm_2 		0.776 0.776
Poxm
M06436_2.00 		Drosophila melanogaster
NNNNNNMVNHNRNSCRTGA
TCAYGSNYNDNBKNNNNNN		 B1H
Zhu et al.(2011)
Poxm_SOLEXA_5_FBgn0003129 		0.776 0.776
PAX1
M03442_2.00 		Homo sapiens
DBCANTSAWGCGTGACS
SGTCACGCWTSANTGVH		 SELEX
Jolma et al.(2013)
PAX1_1 		0.760 0.760
PAX9
M03444_2.00 		Homo sapiens
NKCANTSAWGCGTGACS
SGTCACGCWTSANTGMN		 SELEX
Jolma et al.(2013)
PAX9_1 		0.760 0.760
PAX1
M05687_2.00 		Homo sapiens
BCRNTSRWGCGTGACSN
NSGTCACGCWYSANYGV		 SELEX
Yin et al.(2017)
PAX1_eDBD_HT-SELEX 		0.760 0.760
PAX9
M05689_2.00 		Homo sapiens
BHRNYSRDSCGTRACSN
NSGTYACGSHYSRNYDV		 SELEX
Yin et al.(2017)
PAX9_eDBD_HT-SELEX 		0.760 0.760
PAX1
M11207_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$PAX1_B 		0.760 0.760
PAX1
M05688_2.00 		Homo sapiens
BCRNTSAWGCGTGACSN
NSGTCACGCWTSANYGV		 SELEX
Yin et al.(2017)
PAX1_eDBD_Methyl-HT-SELEX 		0.760 0.760
PAX9
M05690_2.00 		Homo sapiens
BCRNTSAWSCGYGACNN
NNGTCRCGSWTSANYGV		 SELEX
Yin et al.(2017)
PAX9_eDBD_Methyl-HT-SELEX 		0.760 0.760
pax9
M11204_2.00 		Danio rerio Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$PAX9_B 		0.752 0.752
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
HPBE_0001739601-mRNA-1 Paired box 22 146

Links

Other Paired box family TFs
Other Heligmosomoides bakeri TFs

229 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ACYPI005583 Acyrthosiphon pisum ACYPI005583 I 0.760
ENSAMEG00000002906 Ailuropoda melanoleuca ENSAMEG00000002906 I 0.760
ENSAMEG00000012642 Ailuropoda melanoleuca ENSAMEG00000012642 I 0.760
Alligator_sinensis_CCG004503.1 Alligator sinensis Alligator_sinensis_CCG004503.1 I 0.760
ENSAPLG00000012856 Anas platyrhynchos ENSAPLG00000012856 I 0.760
ANCCAN_01783 Ancylostoma caninum ANCCAN_01783 I 0.943
ANCCEY_02265 Ancylostoma ceylanicum ANCCEY_02265 I 0.936
ACAC_0001249001 Angiostrongylus cantonensis ACAC_0001249001 I 0.896
ACOC_0000962101 Angiostrongylus costaricensis ACOC_0000962101 I 0.952
ASIM_0001701001 Anisakis simplex ASIM_0001701001 I 0.752
ENSACAG00000001481 Anolis carolinensis ENSACAG00000001481 I 0.760
ENSACAG00000010563 Anolis carolinensis ENSACAG00000010563 I 0.768
AALB006349 Anopheles albimanus AALB006349 I 0.784
AARA001070 Anopheles arabiensis AARA001070 I 0.784
AATE019429 Anopheles atroparvus AATE019429 I 0.784
ACUA000500 Anopheles culicifacies ACUA000500 I 0.784
ADAC006866 Anopheles darlingi ADAC006866 I 0.784
ADIR000995 Anopheles dirus ADIR000995 I 0.784
AEPI005638 Anopheles epiroticus AEPI005638 I 0.784
AFAF006072 Anopheles farauti AFAF006072 I 0.784
AFUN001734 Anopheles funestus AFUN001734 I 0.804
AGAP001493 Anopheles gambiae AGAP001493 I 0.784
AMAM000649 Anopheles maculatus AMAM000649 I 0.784
AMEC017516 Anopheles melas AMEC017516 I 0.784
AMEM000130 Anopheles merus AMEM000130 I 0.784
AMIN005066 Anopheles minimus AMIN005066 I 0.784
AQUA002471 Anopheles quadriannulatus AQUA002471 I 0.784
ASIS022893 Anopheles sinensis ASIS022893 I 0.804
ASTEI07741 Anopheles stephensi ASTEI07741 I 0.784
GB52620 Apis mellifera GB52620 I 0.784
Afo_R004464 Aptenodytes forsteri Afo_R004464 I 0.760
ALUE_0000964501 Ascaris lumbricoides ALUE_0000964501 I 0.752
ASU_08322 Ascaris suum ASU_08322 I 0.752
ENSAMXG00000002161 Astyanax mexicanus ENSAMXG00000002161 I 0.752
ENSAMXG00000008583 Astyanax mexicanus ENSAMXG00000008583 I 0.760
ENSAMXG00000018287 Astyanax mexicanus ENSAMXG00000018287 I 0.760
ACEP27324 Atta cephalotes ACEP27324 I 0.776
BGLB008429 Biomphalaria glabrata BGLB008429 I 0.715
BGIBMGA000787 Bombyx mori BGIBMGA000787 I 0.776
ENSBTAP00000008861-D1 Bos grunniens ENSBTAP00000008861-D1 I 0.760
ENSP00000384817-D1 Bos grunniens ENSP00000384817-D1 I 0.760
PAX1 Bos taurus ENSBTAG00000006742 I 0.760
PAX9 Bos taurus ENSBTAG00000009186 I 0.760
estExt_fgenesh2_pg.C_420056 Branchiostoma floridae estExt_fgenesh2_pg.C_420056 I 0.744
CBN07010 Caenorhabditis brenneri CBN07010 I 0.728
CBN25998 Caenorhabditis brenneri CBN25998 I 0.728
pax-1 Caenorhabditis elegans WBGene00003937 I 0.736
CJA06788 Caenorhabditis japonica CJA06788 I 0.728
CRE05503 Caenorhabditis remanei CRE05503 I 0.720
PAX1 Callithrix jacchus ENSCJAG00000005773 I 0.760
PAX9 Callithrix jacchus ENSCJAG00000016460 I 0.760
Aan_R005718 Calypte anna Aan_R005718 I 0.760
Cflo_08772--XP_001121954.1_APIME Camponotus floridanus Cflo_08772--XP_001121954.1_APIME I 0.784
PAX1 Canis familiaris ENSCAFG00000005170 I 0.760
PAX9 Canis familiaris ENSCAFG00000013690 I 0.760
CapteG64892 Capitella teleta CapteG64892 I 0.728
PAX1 Cavia porcellus ENSCPOG00000002886 I 0.760
PAX9 Cavia porcellus ENSCPOG00000010951 I 0.760
Cmyd_10010133 Chelonia mydas Cmyd_10010133 I 0.752
ENSCSAG00000011068 Chlorocebus sabaeus ENSCSAG00000011068 I 0.760
ENSCSAG00000015463 Chlorocebus sabaeus ENSCSAG00000015463 I 0.760
CLEC012019 Cimex lectularius CLEC012019 I 0.744
ENSCING00000024971 Ciona intestinalis ENSCING00000024971 I 0.768
ENSCSAVG00000007806 Ciona savignyi ENSCSAVG00000007806 I 0.760
CGI_10005222 Crassostrea gigas CGI_10005222 I 0.736
KGM_09724 Danaus plexippus KGM_09724 I 0.776
pax1a Danio rerio ENSDARG00000008203 I 0.768
pax9 Danio rerio ENSDARG00000053829 D 0.752
pax1b Danio rerio ENSDARG00000073814 I 0.760
DAPPUDRAFT_307722 Daphnia pulex DAPPUDRAFT_307722 I 0.768
PAX9 Dasypus novemcinctus ENSDNOG00000000352 I 0.760
PAX1 Dasypus novemcinctus ENSDNOG00000033546 I 0.760
YQE_12494 Dendroctonus ponderosae YQE_12494 I 0.768
DICVIV_10778 Dictyocaulus viviparus DICVIV_10778 I 0.928
Pax1 Dipodomys ordii ENSDORG00000016051 I 0.760
GF16668 Drosophila ananassae FBgn0093689 I 0.776
GG17455 Drosophila erecta FBgn0109681 I 0.776
GH17421 Drosophila grimshawi FBgn0124891 I 0.776
Poxm Drosophila melanogaster FBgn0003129 D 0.776
GI22750 Drosophila mojavensis FBgn0145477 I 0.776
GL24118 Drosophila persimilis FBgn0161708 I 0.776
GA21910 Drosophila pseudoobscura FBgn0081895 I 0.776
GM26349 Drosophila sechellia FBgn0181202 I 0.776
GJ22751 Drosophila virilis FBgn0209855 I 0.776
GK14101 Drosophila willistoni FBgn0216107 I 0.776
GE24855 Drosophila yakuba FBgn0241954 I 0.776
PAX9 Echinops telfairi ENSETEG00000002086 I 0.760
EVEC_0000163101 Enterobius vermicularis EVEC_0000163101 I 0.800
PAX9 Equus caballus ENSECAG00000023712 I 0.760
PAX1 Erinaceus europaeus ENSEEUG00000007846 I 0.760
PAX9 Felis catus ENSFCAG00000001024 I 0.760
PAX1 Felis catus ENSFCAG00000004293 I 0.760
ENSFALG00000006155 Ficedula albicollis ENSFALG00000006155 I 0.760
ENSGMOG00000009128 Gadus morhua ENSGMOG00000009128 I 0.752
ENSGMOG00000017053 Gadus morhua ENSGMOG00000017053 I 0.744
ENSGMOG00000018913 Gadus morhua ENSGMOG00000018913 I 0.760
PAX9 Gallus gallus ENSGALG00000010114 I 0.760
ENSGALG00000028576 Gallus gallus ENSGALG00000028576 I 0.760
pax1a Gasterosteus aculeatus ENSGACG00000006987 I 0.760
pax9 Gasterosteus aculeatus ENSGACG00000011298 I 0.752
Gfo_R012945 Geospiza fortis Gfo_R012945 I 0.704
PAX9 Gorilla gorilla ENSGGOG00000001528 I 0.760
PAX1 Gorilla gorilla ENSGGOG00000016075 I 0.760
HPLM_0000508801 Haemonchus placei HPLM_0000508801 I 0.928
HHAL005838-PA Halyomorpha halys HHAL005838-PA I 0.785
HMEL004481 Heliconius melpomene HMEL004481 I 0.776
HelroG89496 Helobdella robusta HelroG89496 I 0.724
PAX1 Homo sapiens ENSG00000125813 D 0.760
PAX9 Homo sapiens ENSG00000198807 D 0.760
ENSSTOG00000003000 Ictidomys tridecemlineatus ENSSTOG00000003000 I 0.760
ENSSTOG00000015730 Ictidomys tridecemlineatus ENSSTOG00000015730 I 0.760
ISCW011634 Ixodes scapularis ISCW011634 I 0.736
ENSLACG00000009610 Latimeria chalumnae ENSLACG00000009610 I 0.760
ENSLACG00000015921 Latimeria chalumnae ENSLACG00000015921 I 0.760
ENSLOCG00000013992 Lepisosteus oculatus ENSLOCG00000013992 I 0.752
ENSLOCG00000016871 Lepisosteus oculatus ENSLOCG00000016871 I 0.760
LotgiG161614 Lottia gigantea LotgiG161614 I 0.744
PAX1 Loxodonta africana ENSLAFG00000008908 I 0.758
PAX9 Loxodonta africana ENSLAFG00000017541 I 0.760
LCUP007799 Lucilia cuprina LCUP007799 I 0.776
LLOJ004808 Lutzomyia longipalpis LLOJ004808 I 0.776
ENSP00000355245 Macaca fascicularis ENSP00000355245 I 0.760
ENSP00000381499 Macaca fascicularis ENSP00000381499 I 0.760
PAX9 Macaca mulatta ENSMMUG00000009648 I 0.760
PAX1 Macaca mulatta ENSMMUG00000019409 I 0.760
ENSMEUG00000002095 Macropus eugenii ENSMEUG00000002095 I 0.760
ENSMEUG00000010140 Macropus eugenii ENSMEUG00000010140 I 0.760
MESCA000247 Megaselia scalaris MESCA000247 I 0.727
PAX9 Meleagris gallopavo ENSMGAG00000012530 I 0.760
PAX9 Microcebus murinus ENSMICG00000010808 I 0.760
PAX1 Microcebus murinus ENSMICG00000016968 I 0.752
PAX1 Monodelphis domestica ENSMODG00000006198 I 0.760
PAX9 Monodelphis domestica ENSMODG00000012681 I 0.760
MDOA001030 Musca domestica MDOA001030 I 0.768
ENSMPUG00000001187 Mustela putorius furo ENSMPUG00000001187 I 0.760
ENSMPUG00000016259 Mustela putorius furo ENSMPUG00000016259 I 0.760
Pax9 Mus musculus ENSMUSG00000001497 I 0.760
Pax1 Mus musculus ENSMUSG00000037034 I 0.760
PAX9 Myotis lucifugus ENSMLUG00000011407 I 0.760
PAX1 Myotis lucifugus ENSMLUG00000014710 I 0.760
NV11293 Nasonia vitripennis NV11293 I 0.784
NECAME_07382 Necator americanus NECAME_07382 I 0.811
NBR_0002110501 Nippostrongylus brasiliensis NBR_0002110501 I 0.821
NBR_0002158101 Nippostrongylus brasiliensis NBR_0002158101 N 0.770
ENSNLEG00000003346 Nomascus leucogenys ENSNLEG00000003346 I 0.760
ENSNLEG00000010049 Nomascus leucogenys ENSNLEG00000010049 I 0.760
PAX1 Ochotona princeps ENSOPRG00000017249 I 0.760
Ocbimv22007526m.g Octopus bimaculoides Ocbimv22007526m.g I 0.713
Ogr18451 Ophisaurus gracilis Ogr18451 I 0.760
Ogr19508 Ophisaurus gracilis Ogr19508 I 0.760
ENSONIG00000000990 Oreochromis niloticus ENSONIG00000000990 I 0.752
ENSONIG00000008137 Oreochromis niloticus ENSONIG00000008137 I 0.760
ENSONIG00000018717 Oreochromis niloticus ENSONIG00000018717 I 0.760
PAX1 Ornithorhynchus anatinus ENSOANG00000002008 I 0.760
PAX9 Ornithorhynchus anatinus ENSOANG00000014065 I 0.760
PAX1 Oryctolagus cuniculus ENSOCUG00000003276 I 0.760
PAX9 Oryctolagus cuniculus ENSOCUG00000014321 I 0.736
pax1 Oryzias latipes ENSORLG00000017412 I 0.760
ENSOGAG00000013131 Otolemur garnettii ENSOGAG00000013131 I 0.760
PAX1 Otolemur garnettii ENSOGAG00000033162 I 0.760
ENSOARG00000004951 Ovis aries ENSOARG00000004951 I 0.760
ENSOARG00000008050 Ovis aries ENSOARG00000008050 I 0.760
PAX9 Pan troglodytes ENSPTRG00000006281 I 0.760
PAX1 Pan troglodytes ENSPTRG00000013311 I 0.760
ENSPANG00000000932 Papio anubis ENSPANG00000000932 I 0.760
ENSPANG00000008282 Papio anubis ENSPANG00000008282 I 0.760
PEQ_0000430901 Parascaris equorum PEQ_0000430901 I 0.755
PHUM515110 Pediculus humanus PHUM515110 I 0.760
ENSPSIG00000010961 Pelodiscus sinensis ENSPSIG00000010961 I 0.760
ENSPMAG00000010308 Petromyzon marinus ENSPMAG00000010308 I 0.760
ENSPMAG00000010414 Petromyzon marinus ENSPMAG00000010414 I 0.752
PPAI009002 Phlebotomus papatasi PPAI009002 I 0.776
ENSPFOG00000003208 Poecilia formosa ENSPFOG00000003208 I 0.768
ENSPFOG00000017550 Poecilia formosa ENSPFOG00000017550 I 0.752
Pvit_17942 Pogona vitticeps Pvit_17942 I 0.760
ENSPPYG00000005755 Pongo abelii ENSPPYG00000005755 I 0.760
ENSPPYG00000010758 Pongo abelii ENSPPYG00000010758 I 0.760
PAX1 Procavia capensis ENSPCAG00000003556 I 0.760
PAX1 Pteropus vampyrus ENSPVAG00000002604 I 0.760
PAX9 Pteropus vampyrus ENSPVAG00000003728 I 0.747
Pax9 Rattus norvegicus ENSRNOG00000008826 I 0.760
RPRC009438 Rhodnius prolixus RPRC009438 I 0.733
Sakowv30044183m.g Saccoglossus kowalevskii Sakowv30044183m.g I 0.736
ENSSHAG00000005531 Sarcophilus harrisii ENSSHAG00000005531 I 0.760
ENSSHAG00000017556 Sarcophilus harrisii ENSSHAG00000017556 I 0.760
SBAD_0000488901 Soboliphyme baturini SBAD_0000488901 I 0.730
SINV15629 Solenopsis invicta SINV15629 I 0.784
PAX9 Sorex araneus ENSSARG00000000337 I 0.760
L596_g23601 Steinernema carpocapsae L596_g23601 I 0.704
L889_g19368 Steinernema feltiae L889_g19368 I 0.704
L893_g11572 Steinernema glaseri L893_g11572 I 0.704
L893_g8856 Steinernema glaseri L893_g8856 I 0.704
L892_g31296 Steinernema scapterisci L892_g31296 I 0.704
SMAR007866 Strigamia maritima SMAR007866 I 0.792
SPU_006683 Strongylocentrotus purpuratus SPU_006683 I 0.744
SPU_014539 Strongylocentrotus purpuratus SPU_014539 I 0.704
SPAL_0000396700 Strongyloides papillosus SPAL_0000396700 I 0.712
SSTP_0000083300 Strongyloides stercoralis SSTP_0000083300 I 0.712
SVE_0281100 Strongyloides venezuelensis SVE_0281100 I 0.712
SVUK_0000340101 Strongylus vulgaris SVUK_0000340101 I 0.878
ENSSSCG00000001943 Sus scrofa ENSSSCG00000001943 I 0.760
PAX1 Sus scrofa ENSSSCG00000007112 I 0.760
ENSSSCG00000016229 Sus scrofa ENSSSCG00000016229 I 0.719
SMUV_0000337801 Syphacia muris SMUV_0000337801 I 0.792
ENSTGUG00000007526 Taeniopygia guttata ENSTGUG00000007526 I 0.760
PAX9 Taeniopygia guttata ENSTGUG00000012015 I 0.760
pax1a Takifugu rubripes ENSTRUG00000008079 I 0.760
pax9 Takifugu rubripes ENSTRUG00000011965 I 0.752
ENSTSYG00000008085 Tarsius syrichta ENSTSYG00000008085 I 0.745
TELCIR_14257 Teladorsagia circumcincta TELCIR_14257 I 0.944
TELCIR_18769 Teladorsagia circumcincta TELCIR_18769 N 0.769
ENSTNIG00000002104 Tetraodon nigroviridis ENSTNIG00000002104 I 0.752
pax1a Tetraodon nigroviridis ENSTNIG00000016891 I 0.760
pax9 Tetraodon nigroviridis ENSTNIG00000019284 I 0.752
TCNE_0001785701 Toxocara canis TCNE_0001785701 I 0.752
TC008838 Tribolium castaneum TC008838 I 0.768
D917_06071 Trichinella nativa D917_06071 I 0.735
EFV54842 Trichinella spiralis EFV54842 I 0.726
TMUE_s0003015350 Trichuris muris TMUE_s0003015350 I 0.712
PAX9 Tupaia belangeri ENSTBEG00000002460 I 0.760
PAX5 Tupaia belangeri ENSTBEG00000007983 I 0.745
PAX1 Tursiops truncatus ENSTTRG00000002444 I 0.760
PAX5 Tursiops truncatus ENSTTRG00000006049 I 0.745
pax9.L Xenopus laevis XB-GENE-864845 I 0.760
pax1.S Xenopus laevis XB-GENE-865751 I 0.752
pax9 Xenopus tropicalis XB-GENE-482238 I 0.760
pax1 Xenopus tropicalis XB-GENE-487951 I 0.760
ENSXMAG00000015762 Xiphophorus maculatus ENSXMAG00000015762 I 0.752
ENSXMAG00000019114 Xiphophorus maculatus ENSXMAG00000019114 I 0.768