CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
Cflo_11724--NP_001011602.1_APIME
(
Camponotus floridanus
)
Pipsqueak
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF05225 (HTH_psq)
IPR007889
Cflo_11724--NP_001011602.1_APIME
T314427_2.00
GigaDB (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Cflo_11724--NP_001011602.1_APIME
Pipsqueak
142
185
TQEDMDAALDALRNHNMSLTKASATFGIPSTTLWQRAHRLGIDT
Cflo_11724--NP_001011602.1_APIME
Pipsqueak
196
238
SDESLNNALEALRTGTISANKASKAFGIPSSTLYKIARKEGIR
Cflo_11724--NP_001011602.1_APIME
Pipsqueak
251
296
TPADLDRALEAIRSGQTSVQRASTEFGIPTGTLYGRCKREGIELSR
Cflo_11724--NP_001011602.1_APIME
Pipsqueak
303
346
SEDAMTEALEAVRLGHMSINQAAIHYNLPYSSLYGRFKRGKYEE
Links
Other
Pipsqueak
family TFs
Other
Camponotus floridanus
TFs
42 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
csin107779
Clonorchis sinensis
csin107779
I
EmuJ_000425100
Echinococcus multilocularis
EmuJ_000425100
N
D915_04370
Fasciola hepatica
D915_04370
I
TTAC_0001070001
Hydatigera taeniaeformis
TTAC_0001070001
N
HDID_0000765101
Hymenolepis diminuta
HDID_0000765101
N
HmN_000820000
Hymenolepis microstoma
HmN_000820000
N
HNAJ_0000435901
Hymenolepis nana
HNAJ_0000435901
N
MCOS_0000678201
Mesocestoides corti
MCOS_0000678201
N
T265_11442
Opisthorchis viverrini
T265_11442
I
PXEA_0000808001
Protopolystoma xenopodis
PXEA_0000808001
N
SSLN_0000326401
Schistocephalus solidus
SSLN_0000326401
N
SCUD_0001319701
Schistosoma curassoni
SCUD_0001319701
I
Sjc_0075320
Schistosoma japonicum
Sjc_0075320
I
Smp_018170
Schistosoma mansoni
Smp_018170
I
SMRZ_0002428501
Schistosoma margrebowiei
SMRZ_0002428501
I
SMTD_0001143301
Schistosoma mattheei
SMTD_0001143301
I
SROB_0001285401
Schistosoma rodhaini
SROB_0001285401
I
SPER_0000415601
Spirometra erinaceieuropaei
SPER_0000415601
N
TsM_000587400
Taenia solium
TsM_000587400
N
tetur11g05790
Tetranychus urticae
tetur11g05790
I
TRE_0000459601
Trichobilharzia regenti
TRE_0000459601
I