GPUH_0002653201 (Gongylonema pulchrum)
POU

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00157 (Pou) IPR000327 GPUH_0002653201 T316340_2.00 WormBase:ParaSite (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
Pou2f1
M00803_2.00 		Mus musculus
NHATWWNHNN
NNDNWWATDN		 PBM
Weirauch et al.(2013)
pTH4325 		0.764 0.764
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
GPUH_0002653201-mRNA-1 POU 47 118

Links

Other POU family TFs
Other Gongylonema pulchrum TFs

32 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ZFP5 Arabidopsis thaliana AT1G10480 D 0.000
Bostr.13671s0437 Boechera stricta Bostr.13671s0437 I 0.000
Bo8g109510 Brassica oleracea Bo8g109510 I 0.000
Carubv10018785m.g Capsella rubella Carubv10018785m.g I 0.000
evm.TU.supercontig_1307.1 Carica papaya evm.TU.supercontig_1307.1 I 0.000
Thhalv10008773m.g Eutrema salsugineum Thhalv10008773m.g I 0.000
Lus10017229.g Linum usitatissimum Lus10017229.g I 0.000
chr5.LjT04G07.90.nd Lotus japonicus chr5.LjT04G07.90.nd I 0.000
MDP0000121370 Malus domestica MDP0000121370 I 0.000
MDP0000165710 Malus domestica MDP0000165710 I 0.000
MDP0000166683 Malus domestica MDP0000166683 I 0.000
cassava45710.m1 Manihot esculenta cassava45710.m1 I 0.000
e_gw1.34.233.1 Physcomitrella patens e_gw1.34.233.1 I 0.000
Pm008291 Prunus mume Pm008291 I 0.000
30076.m004693 Ricinus communis 30076.m004693 I 0.000
SapurV1A.0052s0050 Salix purpurea SapurV1A.0052s0050 I 0.000
SELMODRAFT_450830 Selaginella moellendorffii SELMODRAFT_450830 I 0.000
SELMODRAFT_450817 Selaginella moellendorffii SELMODRAFT_450817 I 0.000
Solyc10g078990.1 Solanum lycopersicum Solyc10g078990.1 I 0.000
Solyc10g078970.1 Solanum lycopersicum Solyc10g078970.1 I 0.000
PGSC0003DMG400011450 Solanum tuberosum PGSC0003DMG400011450 I 0.000
GRMZM2G703281 Zea mays GRMZM2G703281 I 0.000