CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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NBR_0000066801
(
Nippostrongylus brasiliensis
)
Prospero
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF05044 (HPD)
IPR007738
NBR_0000066801
T316769_2.00
WormBase:ParaSite (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
pros-1
M00708_2.00
Caenorhabditis elegans
NNBRAGRHDN
NHDYCTYVNN
PBM
Narasimhan et al.(2015)
pTH9164
0.792
0.792
For this family, TFs with SR scores >
0.700
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
NBR_0000066801-mRNA-1
Prospero
184
337
TLTPVHLRKAKLMFFYTRYPNSTLLKSYFPDVRFNKNNTAQLVKWFSNFREFYYIQMDKFARQALAEGITSRDDIVVTMDSEIFRTLNQHYNRNNHVQPPENLVNVVQESLREFFDAIRLGKDAEPSWKKQIYKIINRLDDQIPEYFKDPNFLE
Links
Other
Prospero
family TFs
Other
Nippostrongylus brasiliensis
TFs
85 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
fgenesh2_kg.5__1064__AT3G46950.1
Arabidopsis lyrata
fgenesh2_kg.5__1064__AT3G46950.1
N
scaffold_200344.1
Arabidopsis lyrata
scaffold_200344.1
N
AT1G61960
Arabidopsis thaliana
AT1G61960
N
AT1G62110
Arabidopsis thaliana
AT1G62110
N
AT3G46950
Arabidopsis thaliana
AT3G46950
N
Bostr.22157s0164
Boechera stricta
Bostr.22157s0164
N
Bostr.22157s0168
Boechera stricta
Bostr.22157s0168
N
Bra034464
Brassica rapa
Bra034464
N
Cagra.6049s0005
Capsella grandiflora
Cagra.6049s0005
N
Carubv10020262m.g
Capsella rubella
Carubv10020262m.g
N
Carubv10021881m.g
Capsella rubella
Carubv10021881m.g
N
Thhalv10022427m.g
Eutrema salsugineum
Thhalv10022427m.g
N