CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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LDEC020504
(
Leptinotarsa decemlineata
)
Runt
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00853 (Runt)
IPR013524
LDEC020504
T319697_2.00
Misc (2018-Jan-19)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
LDEC020504-PA
Runt
173
231
RASRIADIQYSYYDSSVKAKTRKSFTLTIIVSTSPPQVATYSKAIKVTVDGPREPRSKT
Links
Other
Runt
family TFs
Other
Leptinotarsa decemlineata
TFs
20 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Cagra.1772s0003
Capsella grandiflora
Cagra.1772s0003
I
Carubv10014232m.g
Capsella rubella
Carubv10014232m.g
I
Ciclev10013876m.g
Citrus clementina
Ciclev10013876m.g
N
orange1.1g038848m.g
Citrus sinensis
orange1.1g038848m.g
N
Gorai.007G363700
Gossypium raimondii
Gorai.007G363700
N
Gorai.011G177600
Gossypium raimondii
Gorai.011G177600
N
cassava32147.m1
Manihot esculenta
cassava32147.m1
N
POPTR_0006s21630
Populus trichocarpa
POPTR_0006s21630
N
POPTR_0016s06850
Populus trichocarpa
POPTR_0016s06850
N
29333.m001063
Ricinus communis
29333.m001063
N
SapurV1A.0258s0020
Salix purpurea
SapurV1A.0258s0020
N
SapurV1A.0980s0020
Salix purpurea
SapurV1A.0980s0020
N
SapurV1A.1209s0030
Salix purpurea
SapurV1A.1209s0030
N
TCM_022993
Theobroma cacao
TCM_022993
N
TCM_023041
Theobroma cacao
TCM_023041
N