POPTR_0006s21630 (Populus trichocarpa)
MADS box

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00319 (SRF-TF) IPR002100 POPTR_0006s21630 T255831_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
POPTR_0006s21630.1 MADS box 10 53

Links

Other MADS box family TFs
Other Populus trichocarpa TFs

12 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
POPTR_0016s06850 Populus trichocarpa POPTR_0016s06850 N 0.977
SapurV1A.0258s0020 Salix purpurea SapurV1A.0258s0020 N 0.932
SapurV1A.0980s0020 Salix purpurea SapurV1A.0980s0020 N 0.932
29333.m001063 Ricinus communis 29333.m001063 N 0.864
SapurV1A.1209s0030 Salix purpurea SapurV1A.1209s0030 N 0.812
cassava32147.m1 Manihot esculenta cassava32147.m1 N 0.778
Ciclev10013876m.g Citrus clementina Ciclev10013876m.g N 0.778
orange1.1g038848m.g Citrus sinensis orange1.1g038848m.g N 0.778
TCM_022993 Theobroma cacao TCM_022993 N 0.750
TCM_023006 Theobroma cacao TCM_023006 N 0.750
POPTR_0005s00420 Populus trichocarpa POPTR_0005s00420 I 0.705
chr6.LjT19B22.120.nd Lotus japonicus chr6.LjT19B22.120.nd I 0.705