CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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SapurV1A.0258s0020
(
Salix purpurea
)
MADS box
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00319 (SRF-TF)
IPR002100
SapurV1A.0258s0020
T259018_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
SapurV1A.0258s0020.1.p
MADS box
10
53
WIVNDAARKASLKKRRDGLLKKVSELTILCGIEAFVIIYCPDDP
Links
Other
MADS box
family TFs
Other
Salix purpurea
TFs
12 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
SapurV1A.0980s0020
Salix purpurea
SapurV1A.0980s0020
N
1.000
POPTR_0016s06850
Populus trichocarpa
POPTR_0016s06850
N
0.955
POPTR_0006s21630
Populus trichocarpa
POPTR_0006s21630
N
0.932
29333.m001063
Ricinus communis
29333.m001063
N
0.818
cassava32147.m1
Manihot esculenta
cassava32147.m1
N
0.773
SapurV1A.1209s0030
Salix purpurea
SapurV1A.1209s0030
N
0.771
orange1.1g038848m.g
Citrus sinensis
orange1.1g038848m.g
N
0.727
Ciclev10013876m.g
Citrus clementina
Ciclev10013876m.g
N
0.727
TCM_023041
Theobroma cacao
TCM_023041
N
0.727
TCM_023006
Theobroma cacao
TCM_023006
N
0.727
Ca_08934
Cicer arietinum
Ca_08934
I
0.705
TCM_022993
Theobroma cacao
TCM_022993
N
0.705