GRMZM2G475305 (Zea mays)
RWP-RK

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF02042 (RWP-RK) IPR003035 GRMZM2G475305 T320115_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
NLP7
M07251_2.00 		Arabidopsis thaliana
WNDTGNCYYTTSRDD
HHYSAARRGNCAHNW		 Dap-seq
OMalley et al.(2016)
NLP7_col_a 		0.918 0.918
NLP4
M07248_2.00 		Arabidopsis thaliana
NNHNNBTGCTGYHNN
NNDRCAGCAVNNDNN		 Dap-seq
OMalley et al.(2016)
AtNLP4_col_b 		0.796 0.796
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
GRMZM2G475305_P01 RWP-RK 573 621

Links

Other RWP-RK family TFs
Other Zea mays TFs

415 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
F775_11253 Aegilops tauschii F775_11253 N
AMTR_s00008p00198780 Amborella trichopoda AMTR_s00008p00198780 N
AMTR_s00089p00043950 Amborella trichopoda AMTR_s00089p00043950 N
Aquca_005_00478 Aquilegia coerulea Aquca_005_00478 N
Aquca_034_00130 Aquilegia coerulea Aquca_034_00130 N
fgenesh1_pg.C_scaffold_1002057 Arabidopsis lyrata fgenesh1_pg.C_scaffold_1002057 N
scaffold_105519.1 Arabidopsis lyrata scaffold_105519.1 N
FMA Arabidopsis lyrata scaffold_302925.1 N
AT1G22490 Arabidopsis thaliana AT1G22490 N
BHLH96 Arabidopsis thaliana AT1G72210 N
FAMA Arabidopsis thaliana AT3G24140 N
Bostr.10273s0131 Boechera stricta Bostr.10273s0131 N
Bostr.12659s0103 Boechera stricta Bostr.12659s0103 N
Bostr.19424s0222 Boechera stricta Bostr.19424s0222 N
Bo1g101110 Brassica oleracea Bo1g101110 N
Bo3g082010 Brassica oleracea Bo3g082010 N
Bo5g038570 Brassica oleracea Bo5g038570 N
Bo6g092570 Brassica oleracea Bo6g092570 N
Bo7g037540 Brassica oleracea Bo7g037540 N
Bo7g057920 Brassica oleracea Bo7g057920 N
Bo8g071490 Brassica oleracea Bo8g071490 N
Bo9g055890 Brassica oleracea Bo9g055890 N
Bra001929 Brassica rapa Bra001929 N
Bra003886 Brassica rapa Bra003886 N
Bra012329 Brassica rapa Bra012329 N
Bra016080 Brassica rapa Bra016080 N
Bra016377 Brassica rapa Bra016377 N
Bra027958 Brassica rapa Bra027958 N
Bra028357 Brassica rapa Bra028357 N
Bra040856 Brassica rapa Bra040856 N
PK04856.1 Cannabis sativa PK04856.1 N
PK14736.1 Cannabis sativa PK14736.1 N
PK21294.1 Cannabis sativa PK21294.1 N
PK28391.1 Cannabis sativa PK28391.1 N
Cagra.0026s0026 Capsella grandiflora Cagra.0026s0026 N
Cagra.0114s0053 Capsella grandiflora Cagra.0114s0053 N
Cagra.4006s0007 Capsella grandiflora Cagra.4006s0007 N
Carubv10011476m.g Capsella rubella Carubv10011476m.g N
Carubv10013821m.g Capsella rubella Carubv10013821m.g N
Carubv10020657m.g Capsella rubella Carubv10020657m.g N
evm.TU.supercontig_36.191 Carica papaya evm.TU.supercontig_36.191 N
evm.TU.supercontig_48.15 Carica papaya evm.TU.supercontig_48.15 N
evm.TU.supercontig_59.132 Carica papaya evm.TU.supercontig_59.132 N
Ca_01181 Cicer arietinum Ca_01181 N
Ca_12363 Cicer arietinum Ca_12363 N
Ca_16010 Cicer arietinum Ca_16010 N
Cla005338 Citrullus lanatus Cla005338 N
Cla016479 Citrullus lanatus Cla016479 N
Cla020173 Citrullus lanatus Cla020173 N
Cla021744 Citrullus lanatus Cla021744 N
Cla022458 Citrullus lanatus Cla022458 N
Ciclev10001811m.g Citrus clementina Ciclev10001811m.g N
Ciclev10005031m.g Citrus clementina Ciclev10005031m.g N
orange1.1g014477m.g Citrus sinensis orange1.1g014477m.g N
orange1.1g020210m.g Citrus sinensis orange1.1g020210m.g N
orange1.1g036531m.g Citrus sinensis orange1.1g036531m.g N
Cucsa.091670 Cucumis sativus Cucsa.091670 N
Cucsa.160250 Cucumis sativus Cucsa.160250 N
Cucsa.163550 Cucumis sativus Cucsa.163550 N
Cucsa.256420 Cucumis sativus Cucsa.256420 N
Cucsa.313010 Cucumis sativus Cucsa.313010 N
Eucgr.B00048 Eucalyptus grandis Eucgr.B00048 N
Eucgr.E00273 Eucalyptus grandis Eucgr.E00273 N
Eucgr.H04468 Eucalyptus grandis Eucgr.H04468 N
Thhalv10002558m.g Eutrema salsugineum Thhalv10002558m.g N
Thhalv10009836m.g Eutrema salsugineum Thhalv10009836m.g N
Thhalv10018867m.g Eutrema salsugineum Thhalv10018867m.g N
gene02199-v1.0-hybrid Fragaria vesca gene02199-v1.0-hybrid N
gene12030-v1.0-hybrid Fragaria vesca gene12030-v1.0-hybrid N
gene16221-v1.0-hybrid Fragaria vesca gene16221-v1.0-hybrid N
gene22289-v1.0-hybrid Fragaria vesca gene22289-v1.0-hybrid N
GLYMA01G23230 Glycine max GLYMA01G23230 N
GLYMA02G14290 Glycine max GLYMA02G14290 N
GLYMA02G37313 Glycine max GLYMA02G37313 N
GLYMA03G39990 Glycine max GLYMA03G39990 N
GLYMA04G10630 Glycine max GLYMA04G10630 N
GLYMA06G10470 Glycine max GLYMA06G10470 N
GLYMA06G35330 Glycine max GLYMA06G35330 N
GLYMA08G36590 Glycine max GLYMA08G36590 N
GLYMA14G35560 Glycine max GLYMA14G35560 N
GLYMA19G42520 Glycine max GLYMA19G42520 N
GLYMA20G37550 Glycine max GLYMA20G37550 N
Gorai.004G243100 Gossypium raimondii Gorai.004G243100 N
Gorai.006G217200 Gossypium raimondii Gorai.006G217200 N
Gorai.007G294800 Gossypium raimondii Gorai.007G294800 N
Gorai.008G225800 Gossypium raimondii Gorai.008G225800 N
Gorai.011G159100 Gossypium raimondii Gorai.011G159100 N
MLOC_21759 Hordeum vulgare MLOC_21759 N
MLOC_45114 Hordeum vulgare MLOC_45114 N
MLOC_67091 Hordeum vulgare MLOC_67091 N
LPERR02G23260 Leersia perrieri LPERR02G23260 N
LPERR04G19210 Leersia perrieri LPERR04G19210 N
Lus10000332.g Linum usitatissimum Lus10000332.g N
Lus10001271.g Linum usitatissimum Lus10001271.g N
Lus10009475.g Linum usitatissimum Lus10009475.g N
Lus10016680.g Linum usitatissimum Lus10016680.g N
Lus10029950.g Linum usitatissimum Lus10029950.g N
chr1.CM0544.580.nd Lotus japonicus chr1.CM0544.580.nd N
chr1.LjT16B05.110.nd Lotus japonicus chr1.LjT16B05.110.nd N
chr1.LjT40H13.220.nd Lotus japonicus chr1.LjT40H13.220.nd N
chr5.CM0211.190.nc Lotus japonicus chr5.CM0211.190.nc N
chr6.CM0738.340.nd Lotus japonicus chr6.CM0738.340.nd N
MDP0000267178 Malus domestica MDP0000267178 N
MDP0000646823 Malus domestica MDP0000646823 N
MDP0000672131 Malus domestica MDP0000672131 N
MDP0000944210 Malus domestica MDP0000944210 N
cassava13431.valid.m1 Manihot esculenta cassava13431.valid.m1 N
cassava19507.valid.m1 Manihot esculenta cassava19507.valid.m1 N
cassava22781.valid.m1 Manihot esculenta cassava22781.valid.m1 N
cassava27750.m1 Manihot esculenta cassava27750.m1 N
cassava27856.m1 Manihot esculenta cassava27856.m1 N
cassava31098.valid.m1 Manihot esculenta cassava31098.valid.m1 N
cassava35271.valid.m1 Manihot esculenta cassava35271.valid.m1 N
MTR_0194s0050 Medicago truncatula MTR_0194s0050 N
MTR_3g099620 Medicago truncatula MTR_3g099620 N
MTR_7g113830 Medicago truncatula MTR_7g113830 N
MTR_8g066770 Medicago truncatula MTR_8g066770 N
mgf015694m Mimulus guttatus mgf015694m N
GSMUA_Achr10G30300_001 Musa acuminata GSMUA_Achr10G30300_001 N
GSMUA_Achr11G00350_001 Musa acuminata GSMUA_Achr11G00350_001 N
GSMUA_Achr11G02740_001 Musa acuminata GSMUA_Achr11G02740_001 N
GSMUA_Achr3G06660_001 Musa acuminata GSMUA_Achr3G06660_001 N
GSMUA_Achr7G12790_001 Musa acuminata GSMUA_Achr7G12790_001 N
GSMUA_Achr8G12330_001 Musa acuminata GSMUA_Achr8G12330_001 N
GSMUA_Achr8G17650_001 Musa acuminata GSMUA_Achr8G17650_001 N
GSMUA_Achr9G15000_001 Musa acuminata GSMUA_Achr9G15000_001 N
OBART02G28630 Oryza barthii OBART02G28630 N
OBART04G23490 Oryza barthii OBART04G23490 N
OB02G35790 Oryza brachyantha OB02G35790 N
OB04G30380 Oryza brachyantha OB04G30380 N
OB09G19960 Oryza brachyantha OB09G19960 N
ORGLA02G0246400 Oryza glaberrima ORGLA02G0246400 N
ORGLA04G0200200 Oryza glaberrima ORGLA04G0200200 N
ORGLA09G0101900 Oryza glaberrima ORGLA09G0101900 N
OGLUM04G23410 Oryza glumaepatula OGLUM04G23410 N
BGIOSGA008846 Oryza indica BGIOSGA008846 N
BGIOSGA017025 Oryza indica BGIOSGA017025 N
BGIOSGA030936 Oryza indica BGIOSGA030936 N
OLONG_028191 Oryza longistaminata OLONG_028191 N
OMERI03G01350 Oryza meridionalis OMERI03G01350 N
OMERI09G10430 Oryza meridionalis OMERI09G10430 N
ONIVA04G03690 Oryza nivara ONIVA04G03690 N
ONIVA04G22720 Oryza nivara ONIVA04G22720 N
ONIVA09G13890 Oryza nivara ONIVA09G13890 N
OPUNC02G26270 Oryza punctata OPUNC02G26270 N
OPUNC04G21010 Oryza punctata OPUNC04G21010 N
OPUNC09G11790 Oryza punctata OPUNC09G11790 N
ORUFI02G30170 Oryza rufipogon ORUFI02G30170 N
ORUFI04G25160 Oryza rufipogon ORUFI04G25160 N
ORUFI09G14410 Oryza rufipogon ORUFI09G14410 N
OS02G0691500 Oryza sativa OS02G0691500 N
OS09G0468700 Oryza sativa OS09G0468700 N
Pavir.Ab02502 Panicum virgatum Pavir.Ab02502 N
Pavir.Bb02386 Panicum virgatum Pavir.Bb02386 N
Pavir.Ga00771 Panicum virgatum Pavir.Ga00771 N
Pavir.J15346 Panicum virgatum Pavir.J15346 N
Pavir.J22933 Panicum virgatum Pavir.J22933 N
POPTR_0001s02350 Populus trichocarpa POPTR_0001s02350 N
POPTR_0001s32160 Populus trichocarpa POPTR_0001s32160 N
POPTR_0002s10230 Populus trichocarpa POPTR_0002s10230 N
POPTR_0002s18100 Populus trichocarpa POPTR_0002s18100 N
POPTR_0003s09200 Populus trichocarpa POPTR_0003s09200 N
POPTR_0005s04160 Populus trichocarpa POPTR_0005s04160 N
POPTR_0013s02680 Populus trichocarpa POPTR_0013s02680 N
POPTR_0017s08160 Populus trichocarpa POPTR_0017s08160 N
Pm003380 Prunus mume Pm003380 N
Pm004489 Prunus mume Pm004489 N
Pm009474 Prunus mume Pm009474 N
Pm023207 Prunus mume Pm023207 N
PRUPE_ppa009461mg Prunus persica PRUPE_ppa009461mg N
PRUPE_ppa011095mg Prunus persica PRUPE_ppa011095mg N
PRUPE_ppa017746mg Prunus persica PRUPE_ppa017746mg N
PRUPE_ppa020429mg Prunus persica PRUPE_ppa020429mg N
29904.m002956 Ricinus communis 29904.m002956 N
29908.m006098 Ricinus communis 29908.m006098 N
30054.m000819 Ricinus communis 30054.m000819 N
30128.m008737 Ricinus communis 30128.m008737 N
SapurV1A.0003s0430 Salix purpurea SapurV1A.0003s0430 N
SapurV1A.0092s0130 Salix purpurea SapurV1A.0092s0130 N
SapurV1A.0462s0070 Salix purpurea SapurV1A.0462s0070 N
SapurV1A.0613s0120 Salix purpurea SapurV1A.0613s0120 N
SapurV1A.1055s0160 Salix purpurea SapurV1A.1055s0160 N
SapurV1A.1124s0170 Salix purpurea SapurV1A.1124s0170 N
SELMODRAFT_428659 Selaginella moellendorffii SELMODRAFT_428659 N
SELMODRAFT_430716 Selaginella moellendorffii SELMODRAFT_430716 N
Si010485m.g Setaria italica Si010485m.g N
Si013925m.g Setaria italica Si013925m.g N
Si017715m.g Setaria italica Si017715m.g N
Solyc01g098720.2 Solanum lycopersicum Solyc01g098720.2 N
Solyc05g053660.1 Solanum lycopersicum Solyc05g053660.1 N
Solyc08g076820.2 Solanum lycopersicum Solyc08g076820.2 N
Solyc09g091760.1 Solanum lycopersicum Solyc09g091760.1 N
PGSC0003DMG400015760 Solanum tuberosum PGSC0003DMG400015760 N
PGSC0003DMG400017540 Solanum tuberosum PGSC0003DMG400017540 N
PGSC0003DMG400028578 Solanum tuberosum PGSC0003DMG400028578 N
PGSC0003DMG400029634 Solanum tuberosum PGSC0003DMG400029634 N
Sb02g027210 Sorghum bicolor Sb02g027210 N
Sb04g031250 Sorghum bicolor Sb04g031250 N
TCM_015694 Theobroma cacao TCM_015694 N
TCM_020336 Theobroma cacao TCM_020336 N
TCM_026599 Theobroma cacao TCM_026599 N
TCM_034439 Theobroma cacao TCM_034439 N
Traes_2BL_E58521BDF Triticum aestivum Traes_2BL_E58521BDF N
Traes_5BL_DA72CE20D Triticum aestivum Traes_5BL_DA72CE20D N
Traes_6DL_882BC1812 Triticum aestivum Traes_6DL_882BC1812 N
TRIUR3_09788 Triticum urartu TRIUR3_09788 N
bHLH071 Vitis vinifera VIT_02s0012g01450 N
FMA Vitis vinifera VIT_05s0029g00050 N
VIT_14s0128g00110 Vitis vinifera VIT_14s0128g00110 N
VIT_18s0001g06650 Vitis vinifera VIT_18s0001g06650 N
GRMZM2G082586 Zea mays GRMZM2G082586 N
GRMZM2G091003 Zea mays GRMZM2G091003 N
GRMZM2G111146 Zea mays GRMZM2G111146 N