Traes_4AL_F5C91EC4A (Triticum aestivum)
RWP-RK

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF02042 (RWP-RK) IPR003035 Traes_4AL_F5C91EC4A T320868_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
NLP7
M07251_2.00 		Arabidopsis thaliana
WNDTGNCYYTTSRDD
HHYSAARRGNCAHNW		 Dap-seq
OMalley et al.(2016)
NLP7_col_a 		0.878 0.878
NLP4
M07248_2.00 		Arabidopsis thaliana
NNHNNBTGCTGYHNN
NNDRCAGCAVNNDNN		 Dap-seq
OMalley et al.(2016)
AtNLP4_col_b 		0.857 0.857
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Traes_4AL_F5C91EC4A.1 RWP-RK 541 589

Links

Other RWP-RK family TFs
Other Triticum aestivum TFs

419 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
F775_24386 Aegilops tauschii F775_24386 I 0.000
F775_16855 Aegilops tauschii F775_16855 I 0.000
TGA10 Arabidopsis lyrata fgenesh2_kg.6__632__AT5G06839.2 I 0.000
PAN Arabidopsis lyrata fgenesh2_kg.2__1120__AT1G68640.1 I 0.000
TGA10 Arabidopsis thaliana AT5G06839 D 0.000
Bostr.13129s0288 Boechera stricta Bostr.13129s0288 I 0.000
Bostr.26959s0025 Boechera stricta Bostr.26959s0025 I 0.000
BRADI4G33740 Brachypodium distachyon BRADI4G33740 N 0.000
Bo9g175780 Brassica oleracea Bo9g175780 I 0.000
Bo3g004060 Brassica oleracea Bo3g004060 I 0.000
Cagra.8005s0020 Capsella grandiflora Cagra.8005s0020 I 0.000
Carubv10003744m.g Capsella rubella Carubv10003744m.g I 0.000
Ciclev10031441m.g Citrus clementina Ciclev10031441m.g I 0.000
orange1.1g018357m.g Citrus sinensis orange1.1g018357m.g I 0.000
Eucgr.K01822 Eucalyptus grandis Eucgr.K01822 I 0.000
Eucgr.G02341 Eucalyptus grandis Eucgr.G02341 I 0.000
Thhalv10014032m.g Eutrema salsugineum Thhalv10014032m.g I 0.000
GLYMA03G29825 Glycine max GLYMA03G29825 I 0.000
GLYMA19G32715 Glycine max GLYMA19G32715 I 0.000
MLOC_58614 Hordeum vulgare MLOC_58614 I 0.000
MLOC_68986 Hordeum vulgare MLOC_68986 N 0.000
LPERR05G14450 Leersia perrieri LPERR05G14450 I 0.000
LPERR09G10860 Leersia perrieri LPERR09G10860 N 0.000
GSMUA_Achr11G14570_001 Musa acuminata GSMUA_Achr11G14570_001 I 0.000
OBART05G18270 Oryza barthii OBART05G18270 I 0.000
OBART09G14730 Oryza barthii OBART09G14730 N 0.000
OB05G26080 Oryza brachyantha OB05G26080 I 0.000
OB09G21260 Oryza brachyantha OB09G21260 N 0.000
ORGLA05G0158500 Oryza glaberrima ORGLA05G0158500 I 0.000
ORGLA09G0113500 Oryza glaberrima ORGLA09G0113500 N 0.000
OGLUM09G15360 Oryza glumaepatula OGLUM09G15360 N 0.000
OGLUM05G19350 Oryza glumaepatula OGLUM05G19350 I 0.000
BGIOSGA029546 Oryza indica BGIOSGA029546 N 0.000
BGIOSGA019942 Oryza indica BGIOSGA019942 I 0.000
OLONG_005656 Oryza longistaminata OLONG_005656 I 0.000
OMERI05G15750 Oryza meridionalis OMERI05G15750 I 0.000
OMERI09G11450 Oryza meridionalis OMERI09G11450 N 0.000
ONIVA05G19180 Oryza nivara ONIVA05G19180 I 0.000
ONIVA08G17430 Oryza nivara ONIVA08G17430 N 0.000
OPUNC09G13200 Oryza punctata OPUNC09G13200 N 0.000
ORUFI05G19430 Oryza rufipogon ORUFI05G19430 I 0.000
ORUFI09G15880 Oryza rufipogon ORUFI09G15880 N 0.000
OS05G0443900 Oryza sativa OS05G0443900 I 0.000
OS09G0489500 Oryza sativa OS09G0489500 N 0.000
Pavir.J32240 Panicum virgatum Pavir.J32240 N 0.000
Pavir.Hb01807 Panicum virgatum Pavir.Hb01807 I 0.000
Pavir.Db00756 Panicum virgatum Pavir.Db00756 N 0.000
Pavir.Ba01723 Panicum virgatum Pavir.Ba01723 N 0.000
PDK_20s1736691g001 Phoenix dactylifera PDK_20s1736691g001 I 0.000
PDK_20s1405291g002 Phoenix dactylifera PDK_20s1405291g002 I 0.000
Si029606m.g Setaria italica Si029606m.g N 0.000
Si006417m.g Setaria italica Si006417m.g N 0.000
Solyc10g078670.1 Solanum lycopersicum Solyc10g078670.1 I 0.000
Solyc10g080410.1 Solanum lycopersicum Solyc10g080410.1 I 0.000
Solyc11g068370.1 Solanum lycopersicum Solyc11g068370.1 I 0.000
PGSC0003DMG400023678 Solanum tuberosum PGSC0003DMG400023678 I 0.000
Sb10g024190 Sorghum bicolor Sb10g024190 N 0.000
Sb02g028380 Sorghum bicolor Sb02g028380 N 0.000
Traes_6BS_65CDD608F Triticum aestivum Traes_6BS_65CDD608F I 0.000
Traes_1AL_3B659AABA Triticum aestivum Traes_1AL_3B659AABA I 0.000
Traes_1DS_0CFC1995D Triticum aestivum Traes_1DS_0CFC1995D I 0.000
Traes_5AL_39649C38E Triticum aestivum Traes_5AL_39649C38E N 0.000
Traes_5BL_C08428870 Triticum aestivum Traes_5BL_C08428870 N 0.000
Traes_5DL_1950C1FC2 Triticum aestivum Traes_5DL_1950C1FC2 N 0.000
Traes_6DS_FD90D1145 Triticum aestivum Traes_6DS_FD90D1145 I 0.000
Traes_6AS_9916DDE4D Triticum aestivum Traes_6AS_9916DDE4D I 0.000
GRMZM2G029979 Zea mays GRMZM2G029979 I 0.000
GRMZM2G060290 Zea mays GRMZM2G060290 N 0.000
GRMZM2G006578 Zea mays GRMZM2G006578 N 0.000