Carubv10028317m.g (Capsella rubella)
RWP-RK

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF02042 (RWP-RK) IPR003035 Carubv10028317m.g T321102_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Carubv10028317m RWP-RK 138 186

Links

Other RWP-RK family TFs
Other Capsella rubella TFs

34 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
F775_18084 Aegilops tauschii F775_18084 N 0.000
bHLH115 Arabidopsis lyrata fgenesh2_kg.1__4178__AT1G51070.1 N 0.000
Al_scaffold_0004_1533 Arabidopsis lyrata Al_scaffold_0004_1533 N 0.000
scaffold_30700001.1 Arabidopsis lyrata scaffold_30700001.1 N 0.000
bHLH115 Arabidopsis thaliana AT1G51070 N 0.000
Bostr.26675s0081 Boechera stricta Bostr.26675s0081 N 0.000
BRADI2G23520 Brachypodium distachyon BRADI2G23520 N 0.000
PK23013.1 Cannabis sativa PK23013.1 I 0.000
Cagra.5770s0003 Capsella grandiflora Cagra.5770s0003 N 0.000
evm.TU.supercontig_97.78 Carica papaya evm.TU.supercontig_97.78 I 0.000
Ca_16355 Cicer arietinum Ca_16355 I 0.000
Ca_06956 Cicer arietinum Ca_06956 I 0.000
Cla001735 Citrullus lanatus Cla001735 I 0.000
Ciclev10009354m.g Citrus clementina Ciclev10009354m.g I 0.000
orange1.1g026599m.g Citrus sinensis orange1.1g026599m.g I 0.000
Cucsa.267130 Cucumis sativus Cucsa.267130 I 0.000
Cucsa.267170 Cucumis sativus Cucsa.267170 I 0.000
Eucgr.F03420 Eucalyptus grandis Eucgr.F03420 I 0.000
gene24654-v1.0-hybrid Fragaria vesca gene24654-v1.0-hybrid I 0.000
gene03303-v1.0-hybrid Fragaria vesca gene03303-v1.0-hybrid I 0.000
GLYMA06G41620 Glycine max GLYMA06G41620 I 0.000
GLYMA12G16560 Glycine max GLYMA12G16560 N 0.000
Gorai.002G081900 Gossypium raimondii Gorai.002G081900 I 0.000
Gorai.013G164100 Gossypium raimondii Gorai.013G164100 I 0.000
MLOC_60455 Hordeum vulgare MLOC_60455 N 0.000
Lus10011167.g Linum usitatissimum Lus10011167.g I 0.000
Lus10043076.g Linum usitatissimum Lus10043076.g I 0.000
MDP0000264803 Malus domestica MDP0000264803 I 0.000
MDP0000323291 Malus domestica MDP0000323291 N 0.000
cassava24574.valid.m1 Manihot esculenta cassava24574.valid.m1 I 0.000
cassava37032.valid.m1 Manihot esculenta cassava37032.valid.m1 I 0.000
cassava37031.valid.m1 Manihot esculenta cassava37031.valid.m1 I 0.000
MTR_2g082640 Medicago truncatula MTR_2g082640 I 0.000
MTR_4g081370 Medicago truncatula MTR_4g081370 I 0.000
OB05G26550 Oryza brachyantha OB05G26550 N 0.000
Pavir.J15729 Panicum virgatum Pavir.J15729 N 0.000
POPTR_0001s44230 Populus trichocarpa POPTR_0001s44230 I 0.000
POPTR_0011s13580 Populus trichocarpa POPTR_0011s13580 I 0.000
Pm029465 Prunus mume Pm029465 I 0.000
PRUPE_ppa009077mg Prunus persica PRUPE_ppa009077mg I 0.000
PRUPE_ppa010730mg Prunus persica PRUPE_ppa010730mg I 0.000
28166.m001054 Ricinus communis 28166.m001054 I 0.000
SapurV1A.0712s0010 Salix purpurea SapurV1A.0712s0010 I 0.000
Si023133m.g Setaria italica Si023133m.g N 0.000
Solyc07g052670.2 Solanum lycopersicum Solyc07g052670.2 N 0.000
Solyc07g064040.2 Solanum lycopersicum Solyc07g064040.2 I 0.000
PGSC0003DMG400026168 Solanum tuberosum PGSC0003DMG400026168 N 0.000
Sb09g022280 Sorghum bicolor Sb09g022280 N 0.000
TCM_031118 Theobroma cacao TCM_031118 I 0.000
Traes_1AL_81A6723C9 Triticum aestivum Traes_1AL_81A6723C9 N 0.000
Traes_1DL_A2C6C77E8 Triticum aestivum Traes_1DL_A2C6C77E8 N 0.000
TRIUR3_14889 Triticum urartu TRIUR3_14889 N 0.000