AMTR_s00052p00202630 (Amborella trichopoda)
S1FA

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF04689 (S1FA) IPR006779 AMTR_s00052p00202630 T321338_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
S1FA3
M07252_2.00 		Arabidopsis thaliana
RGAASNTTCTAGAAN
NTTCTAGAANSTTCY		 Dap-seq
OMalley et al.(2016)
AT3G09735_col_a 		0.727 0.727
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ERN16457 S1FA 7 72

Links

Other S1FA family TFs
Other Amborella trichopoda TFs

86 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
AGABI2DRAFT_191645 Agaricus bisporus AGABI2DRAFT_191645 N 0.000
M378DRAFT_22958 Amanita muscaria M378DRAFT_22958 N 0.000
BOTBODRAFT_90657 Botryobasidium botryosum BOTBODRAFT_90657 N 0.000
CC1G_11400 Coprinopsis cinerea CC1G_11400 N 0.000
FOMPIDRAFT_1116461 Fomitopsis pinicola FOMPIDRAFT_1116461 N 0.000
GALMADRAFT_227586 Galerina marginata GALMADRAFT_227586 N 0.000
M413DRAFT_292945 Hebeloma cylindrosporum M413DRAFT_292945 N 0.000
HETIRDRAFT_439181 Heterobasidion irregulare HETIRDRAFT_439181 N 0.000
K443DRAFT_167654 Laccaria amethystina K443DRAFT_167654 N 0.000
PHACADRAFT_250106 Phanerochaete carnosa PHACADRAFT_250106 N 0.000
e_gwh2.2.1019.1 Phanerochaete chrysosporium e_gwh2.2.1019.1 N 0.000
PHLGIDRAFT_91671 Phlebiopsis gigantea PHLGIDRAFT_91671 N 0.000
PILCRDRAFT_819051 Piloderma croceum PILCRDRAFT_819051 N 0.000
PredSwiss_CON242.4 Pneumocystis carinii PredSwiss_CON242.4 N 0.000
PredSwiss_EST320.1 Pneumocystis carinii PredSwiss_EST320.1 N 0.000
PNEG_00872 Pneumocystis murina PNEG_00872 N 0.000
PSEUBRA_SCAF25g00980 Pseudozyma brasiliensis PSEUBRA_SCAF25g00980 N 0.000
PFL1_06779 Pseudozyma flocculosa PFL1_06779 N 0.000
PHSY_002600 Pseudozyma hubeiensis PHSY_002600 N 0.000
nhp6 Schizosaccharomyces pombe SPAC57A10.09c I 0.000
sr11268 Sporisorium reilianum sr11268 N 0.000
UHOR_08733 Ustilago hordei UHOR_08733 N 0.000
UM06160 Ustilago maydis UM06160 N 0.000