CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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FOMPIDRAFT_1116461
(
Fomitopsis pinicola
)
Sox
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00505 (HMG_box)
IPR000910
FOMPIDRAFT_1116461
T329909_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
EPT03167
Sox
98
166
PKRPPSSYLLFQNEVRSELKKTHPGMPNNELLGMIAKQWSEMSQGEKEKYENLQKAAKERYLEEKDVYQ
Links
Other
Sox
family TFs
Other
Fomitopsis pinicola
TFs
22 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
e_gwh2.2.1019.1
Phanerochaete chrysosporium
e_gwh2.2.1019.1
N
0.608
PHACADRAFT_250106
Phanerochaete carnosa
PHACADRAFT_250106
N
0.606
AGABI2DRAFT_191645
Agaricus bisporus
AGABI2DRAFT_191645
N
0.593
M378DRAFT_22958
Amanita muscaria
M378DRAFT_22958
N
0.587
GALMADRAFT_227586
Galerina marginata
GALMADRAFT_227586
N
0.571
PHLGIDRAFT_91671
Phlebiopsis gigantea
PHLGIDRAFT_91671
N
0.567
PILCRDRAFT_819051
Piloderma croceum
PILCRDRAFT_819051
N
0.558
K443DRAFT_167654
Laccaria amethystina
K443DRAFT_167654
N
0.548
M413DRAFT_292945
Hebeloma cylindrosporum
M413DRAFT_292945
N
0.539
GLOTRDRAFT_119701
Gloeophyllum trabeum
GLOTRDRAFT_119701
N
0.519
CC1G_11400
Coprinopsis cinerea
CC1G_11400
N
0.514
LACBIDRAFT_294914
Laccaria bicolor
LACBIDRAFT_294914
N
0.496
CERSUDRAFT_111715
Ceriporiopsis subvermispora
CERSUDRAFT_111715
N
0.492
FIBRA_06118
Fibroporia radiculosa
FIBRA_06118
N
0.474
POSPLDRAFT_104147
Postia placenta
POSPLDRAFT_104147
N
0.474
JAAARDRAFT_96982
Jaapia argillacea
JAAARDRAFT_96982
N
0.473
HETIRDRAFT_439181
Heterobasidion irregulare
HETIRDRAFT_439181
N
0.466
estExt_fgenesh3_kg.C_40392
Heterobasidion annosum
estExt_fgenesh3_kg.C_40392
N
0.466
BN946_scf185043.g242
Trametes cinnabarina
BN946_scf185043.g242
N
0.464
SERLA73DRAFT_131740
Serpula lacrymans
SERLA73DRAFT_131740
I
0.420
BOTBODRAFT_90657
Botryobasidium botryosum
BOTBODRAFT_90657
N
0.415
AABR07009373.1
Rattus norvegicus
ENSRNOG00000011429
I
0.415