CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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LACBIDRAFT_294914
(
Laccaria bicolor
)
Sox
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00505 (HMG_box)
IPR000910
LACBIDRAFT_294914
T330870_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
EDR04881
Sox
138
206
PKRPASSYILYQNNVRKELKEQHPEMNNADLLTMISEQWKNMTTEEKDKYNQENKVLTQQYSEEKKAYD
Links
Other
Sox
family TFs
Other
Laccaria bicolor
TFs
21 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
K443DRAFT_167654
Laccaria amethystina
K443DRAFT_167654
N
0.655
GALMADRAFT_227586
Galerina marginata
GALMADRAFT_227586
N
0.597
M413DRAFT_292945
Hebeloma cylindrosporum
M413DRAFT_292945
N
0.575
AGABI2DRAFT_191645
Agaricus bisporus
AGABI2DRAFT_191645
N
0.562
M378DRAFT_22958
Amanita muscaria
M378DRAFT_22958
N
0.538
PHLGIDRAFT_91671
Phlebiopsis gigantea
PHLGIDRAFT_91671
N
0.514
PHACADRAFT_250106
Phanerochaete carnosa
PHACADRAFT_250106
N
0.508
e_gwh2.2.1019.1
Phanerochaete chrysosporium
e_gwh2.2.1019.1
N
0.508
FOMPIDRAFT_1116461
Fomitopsis pinicola
FOMPIDRAFT_1116461
N
0.496
CC1G_11400
Coprinopsis cinerea
CC1G_11400
N
0.493
M407DRAFT_143647
Tulasnella calospora
M407DRAFT_143647
N
0.485
PILCRDRAFT_819051
Piloderma croceum
PILCRDRAFT_819051
N
0.479
PLEOSDRAFT_1102853
Pleurotus ostreatus
PLEOSDRAFT_1102853
N
0.479
BOTBODRAFT_90657
Botryobasidium botryosum
BOTBODRAFT_90657
N
0.474
GLOTRDRAFT_119701
Gloeophyllum trabeum
GLOTRDRAFT_119701
N
0.450
POSPLDRAFT_104147
Postia placenta
POSPLDRAFT_104147
N
0.445
FIBRA_06118
Fibroporia radiculosa
FIBRA_06118
N
0.439
CERSUDRAFT_111715
Ceriporiopsis subvermispora
CERSUDRAFT_111715
N
0.438
SCHCODRAFT_62473
Schizophyllum commune
SCHCODRAFT_62473
N
0.434
HelroG82753
Helobdella robusta
HelroG82753
N
0.426
PIIN_07506
Piriformospora indica
PIIN_07506
N
0.421