CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Cagra.1225s0078
(
Capsella grandiflora
)
SAND
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF01342 (SAND)
IPR000770
Cagra.1225s0078
T322237_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Cagra.1225s0078.1.p
SAND
30
115
DYVEVMCGCTSHRYGDAVARLRVFPSGDLEITCECTPGCDEDKLTPAAFEKHSGRETARKWKNNVWVIIGGEKVPLSKTVLLKYYN
Links
Other
SAND
family TFs
Other
Capsella grandiflora
TFs
37 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Cagra.0380s0018
Capsella grandiflora
Cagra.0380s0018
I
Carubv10006208m.g
Capsella rubella
Carubv10006208m.g
I
Thhalv10026328m.g
Eutrema salsugineum
Thhalv10026328m.g
I
POPTR_0006s08000
Populus trichocarpa
POPTR_0006s08000
N