ENSPFOG00000002285 (Poecilia formosa)
SMAD

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF03165 (MH1) IPR003619 ENSPFOG00000002285 T324871_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
Smad3
M00192_2.00 		Mus musculus
NNNNNMGMCN
NGKCKNNNNN		 PBM
Badis et al.(2009)
Smad3_3805 		0.901 0.901
SMAD3
M03482_2.00 		Homo sapiens
YGTCTAGACA
TGTCTAGACR		 SELEX
Jolma et al.(2013)
SMAD3_1 		0.901 0.901
SMAD3
M09380_2.00 		Homo sapiens
NBCTSHCWSCWB
VWGSWGDSAGVN		 Misc
Kulakovskiy et al.(2013)
SMAD3_HUMAN.H11MO.0.B 		0.901 0.901
Smad3
M09384_2.00 		Mus musculus
NBCTSHCWSCWB
VWGSWGDSAGVN		 Misc
Kulakovskiy et al.(2013)
SMAD3_MOUSE.H11MO.0.B 		0.901 0.901
Smad3
M09637_2.00 		Mus musculus
BYAGMCWN
NWGKCTRV		 Misc
Heinz et al.(2010)
NPC-Smad3_GSE36673 		0.901 0.901
SMAD3
M11283_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$SMAD3_Q6_01 		0.901 0.901
SMAD3
M11284_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$SMAD3_Q6_02 		0.901 0.901
SMAD3
M11285_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$SMAD3_Q6 		0.901 0.901
Mad
M06446_2.00 		Drosophila melanogaster
GYGHCGBCVS
SBGVCGDCRC		 B1H
Zhu et al.(2011)
Mad_FlyReg_FBgn0011648 		0.723 0.723
Mad
M08427_2.00 		Drosophila melanogaster
SNGRCGMSRVSRBNS
SNVYSBYSKCGYCNS		 ChIP-chip
Mathelier et al.(2014)
MA0535.1 		0.723 0.723
Mad
M09692_2.00 		Drosophila melanogaster
KCBGSHGKCGCSNC
GNSGCGMCDSCVGM		 Misc
Kulakovskiy et al.(2009)
Mad 		0.723 0.723
Mad
M11293_2.00 		Drosophila melanogaster Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
I$MAD_Q6 		0.723 0.723
Smad5
M11288_2.00 		Mus musculus Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$SMAD5_01 		0.713 0.713
Smad5
M11292_2.00 		Rattus norvegicus Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$SMAD5_03 		0.713 0.713
SMAD9
M11274_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$SMAD8_01 		0.713 0.713
Smad9
M11290_2.00 		Rattus norvegicus Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$SMAD8_02 		0.713 0.713
Smad9
M11289_2.00 		Mus musculus Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$SMAD8_03 		0.713 0.713
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSPFOP00000002207 SMAD 48 178

Links

Other SMAD family TFs
Other Poecilia formosa TFs

336 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
F775_19529 Aegilops tauschii F775_19529 N
F775_31854 Aegilops tauschii F775_31854 N
BRADI2G60970 Brachypodium distachyon BRADI2G60970 N
BRADI2G61050 Brachypodium distachyon BRADI2G61050 N
BRADI3G43250 Brachypodium distachyon BRADI3G43250 N
MLOC_36351 Hordeum vulgare MLOC_36351 N
MLOC_67053 Hordeum vulgare MLOC_67053 N
MLOC_72280 Hordeum vulgare MLOC_72280 N
LPERR01G38470 Leersia perrieri LPERR01G38470 N
OBART01G44150 Oryza barthii OBART01G44150 N
OB01G53300 Oryza brachyantha OB01G53300 N
ORGLA01G0380200 Oryza glaberrima ORGLA01G0380200 N
OGLUM01G48440 Oryza glumaepatula OGLUM01G48440 N
BGIOSGA000097 Oryza indica BGIOSGA000097 N
BGIOSGA005178 Oryza indica BGIOSGA005178 N
OLONG_006457 Oryza longistaminata OLONG_006457 N
OMERI01G40940 Oryza meridionalis OMERI01G40940 N
ONIVA01G50120 Oryza nivara ONIVA01G50120 N
OPUNC01G43070 Oryza punctata OPUNC01G43070 N
ORUFI01G47560 Oryza rufipogon ORUFI01G47560 N
Pavir.J04771 Panicum virgatum Pavir.J04771 N
Pavir.Ea04053 Panicum virgatum Pavir.Ea04053 N
Si002720m.g Setaria italica Si002720m.g N
Sb03g046090 Sorghum bicolor Sb03g046090 N
Traes_2AL_ACBAA6A31 Triticum aestivum Traes_2AL_ACBAA6A31 N
Traes_2BL_00608F8D6 Triticum aestivum Traes_2BL_00608F8D6 N
Traes_2DL_865346DA2 Triticum aestivum Traes_2DL_865346DA2 N
Traes_3AL_95403ABBA Triticum aestivum Traes_3AL_95403ABBA N
TRAES3BF136000020CFD_g Triticum aestivum TRAES3BF136000020CFD_g N
TRIUR3_18175 Triticum urartu TRIUR3_18175 N
TRIUR3_22165 Triticum urartu TRIUR3_22165 N
GRMZM2G057413 Zea mays GRMZM2G057413 N
AC193786.3_FG005 Zea mays AC193786.3_FG005 N