SOX2 (Procavia capensis)
Sox

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00505 (HMG_box) IPR000910 ENSPCAG00000003690 T328839_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
SOX2
M03519_2.00 		Homo sapiens
DAACAATGKYAKTGTTN
NAACAMTRMCATTGTTH		 SELEX
Jolma et al.(2013)
SOX2_1 		0.284 1.000
SOX2
M03520_2.00 		Homo sapiens
VTGAATGDYATTCAN
NTGAATRHCATTCAB		 SELEX
Jolma et al.(2013)
SOX2_2 		0.284 1.000
SOX2
M03521_2.00 		Homo sapiens
NATCAATGNYATTGAWD
HWTCAATRNCATTGATN		 SELEX
Jolma et al.(2013)
SOX2_3 		0.284 1.000
SOX2
M03522_2.00 		Homo sapiens
NAACAATANCATTGTTH
DAACAATGNTATTGTTN		 SELEX
Jolma et al.(2013)
SOX2_4 		0.284 1.000
SOX2
M03523_2.00 		Homo sapiens
HATCAATANCATTGATH
DATCAATGNTATTGATD		 SELEX
Jolma et al.(2013)
SOX2_5 		0.284 1.000
SOX2
M03524_2.00 		Homo sapiens
DTGAATWNCATTCAH
DTGAATGNWATTCAH		 SELEX
Jolma et al.(2013)
SOX2_6 		0.284 1.000
SOX2
M05897_2.00 		Homo sapiens
NACAAWRRNN
NNYYWTTGTN		 SMiLE-seq
Isakova et al.(2017)
SOX2 		0.284 1.000
Sox2
M08170_2.00 		Mus musculus
CCWTTGTB
VACAAWGG		 ChIP-seq
Mathelier et al.(2014)
MA0143.3 		0.284 1.000
Sox2
M08041_2.00 		Mus musculus
WHWRMADNACAAWRR
YYWTTGTNHTKYWDW		 ChIP-seq
Chen et al.(2011)
SRP000217_Sox2 		0.284 1.000
Sox2
M08042_2.00 		Mus musculus
TTWRCATNWSAAWRV
BYWTTSWNATGYWAA		 ChIP-seq
Chen et al.(2011)
SRP000712_Sox2 		0.284 1.000
SOX2
M09397_2.00 		Homo sapiens
BBYYWTTGTBYBB
VVRVACAAWRRVV		 Misc
Kulakovskiy et al.(2013)
SOX2_HUMAN.H11MO.0.A 		0.284 1.000
Sox2
M09409_2.00 		Mus musculus
THWRCATNACAAWRRV
BYYWTTGTNATGYWDA		 Misc
Kulakovskiy et al.(2013)
SOX2_MOUSE.H11MO.0.A 		0.284 1.000
SOX2
M11327_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$SOX2_Q3_01 		0.284 1.000
SOX2
M11328_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$SOX2_Q3 		0.284 1.000
SOX2
M11329_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$SOX2_Q4 		0.284 1.000
SOX2
M11330_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$SOX2_Q6 		0.284 1.000
For this family, TFs with SR scores > 0.415 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSPCAP00000003409 Sox 1 38

Links

Other Sox family TFs
Other Procavia capensis TFs

281 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
AGABI2DRAFT_196139 Agaricus bisporus AGABI2DRAFT_196139 N 0.000
M378DRAFT_178427 Amanita muscaria M378DRAFT_178427 N 0.000
M378DRAFT_379148 Amanita muscaria M378DRAFT_379148 N 0.000
M378DRAFT_42891 Amanita muscaria M378DRAFT_42891 I 0.000
BOTBODRAFT_575815 Botryobasidium botryosum BOTBODRAFT_575815 N 0.000
CaO19.10341 Candida albicans CaO19.10341 I 0.000
CD36_27640 Candida dubliniensis CD36_27640 I 0.000
G210_0578 Candida maltosa G210_0578 I 0.000
CORT_0A01160 Candida orthopsilosis CORT_0A01160 I 0.000
CPAG_04451 Candida parapsilosis CPAG_04451 I 0.000
CTRG_00834 Candida tropicalis CTRG_00834 I 0.000
CC1G_05834 Coprinopsis cinerea CC1G_05834 N 0.000
DACRYDRAFT_118397 Dacryopinax sp DACRYDRAFT_118397 N 0.000
DICSQDRAFT_139297 Dichomitus squalens DICSQDRAFT_139297 N 0.000
FIBRA_06439 Fibroporia radiculosa FIBRA_06439 N 0.000
FOMPIDRAFT_1062542 Fomitopsis pinicola FOMPIDRAFT_1062542 N 0.000
GALMADRAFT_251818 Galerina marginata GALMADRAFT_251818 N 0.000
GLOTRDRAFT_125036 Gloeophyllum trabeum GLOTRDRAFT_125036 N 0.000
GYMLUDRAFT_76072 Gymnopus luxurians GYMLUDRAFT_76072 N 0.000
M413DRAFT_31731 Hebeloma cylindrosporum M413DRAFT_31731 N 0.000
HelroG70896 Helobdella robusta HelroG70896 I 0.000
fgenesh3_kg.16__43__0_0_CCPB1386.b1_CCOZ_CCPA_CCPB_CCPC_EXTA Heterobasidion annosum fgenesh3_kg.16__43__0_0_CCPB1386.b1_CCOZ_CCPA_CCPB_CCPC_EXTA N 0.000
HETIRDRAFT_411410 Heterobasidion irregulare HETIRDRAFT_411410 N 0.000
HYDPIDRAFT_154960 Hydnomerulius pinastri HYDPIDRAFT_154960 N 0.000
JAAARDRAFT_50784 Jaapia argillacea JAAARDRAFT_50784 N 0.000
K443DRAFT_678919 Laccaria amethystina K443DRAFT_678919 N 0.000
LELG_00108 Lodderomyces elongisporus LELG_00108 I 0.000
MELLADRAFT_114973 Melampsora laricipopulina MELLADRAFT_114973 N 0.000
Moror_8640 Moniliophthora roreri Moror_8640 N 0.000
NV14822 Nasonia vitripennis NV14822 I 0.000
Ocbimv22001036m.g Octopus bimaculoides Ocbimv22001036m.g I 0.000
HPODL_00225 Ogataea parapolymorpha HPODL_00225 I 0.000
PAXINDRAFT_180477 Paxillus involutus PAXINDRAFT_180477 N 0.000
PAXRUDRAFT_824795 Paxillus rubicundulus PAXRUDRAFT_824795 N 0.000
PHACADRAFT_23667 Phanerochaete carnosa PHACADRAFT_23667 N 0.000
PHLGIDRAFT_130081 Phlebiopsis gigantea PHLGIDRAFT_130081 N 0.000
estExt_fgenesh1_pg.C_chr_3.10092 Pichia stipitis estExt_fgenesh1_pg.C_chr_3.10092 I 0.000
PILCRDRAFT_306245 Piloderma croceum PILCRDRAFT_306245 N 0.000
PIIN_02847 Piriformospora indica PIIN_02847 N 0.000
PISMIDRAFT_36586 Pisolithus microcarpus PISMIDRAFT_36586 I 0.000
M404DRAFT_20272 Pisolithus tinctorius M404DRAFT_20272 N 0.000
M404DRAFT_159338 Pisolithus tinctorius M404DRAFT_159338 I 0.000
PLEOSDRAFT_35687 Pleurotus ostreatus PLEOSDRAFT_35687 N 0.000
PLICRDRAFT_179987 Plicaturopsis crispa PLICRDRAFT_179987 N 0.000
POSPLDRAFT_103612 Postia placenta POSPLDRAFT_103612 N 0.000
PGTG_17717 Puccinia graminis PGTG_17717 N 0.000
PTTG_07563 Puccinia triticina PTTG_07563 N 0.000
V565_029720 Rhizoctonia solani V565_029720 N 0.000
V565_060950 Rhizoctonia solani V565_060950 N 0.000
GLOINDRAFT_104797 Rhizophagus irregularis GLOINDRAFT_104797 N 0.000
PICST_67218 Scheffersomyces stipitis PICST_67218 I 0.000
SCHCODRAFT_258750 Schizophyllum commune SCHCODRAFT_258750 N 0.000
SCLCIDRAFT_335403 Scleroderma citrinum SCLCIDRAFT_335403 N 0.000
M408DRAFT_52405 Serendipita vermifera M408DRAFT_52405 N 0.000
SERLA73DRAFT_162951 Serpula lacrymans SERLA73DRAFT_162951 N 0.000
SPAPADRAFT_59824 Spathaspora passalidarum SPAPADRAFT_59824 I 0.000
M422DRAFT_276978 Sphaerobolus stellatus M422DRAFT_276978 N 0.000
SMAR001063 Strigamia maritima SMAR001063 I 0.000
CY34DRAFT_106474 Suillus luteus CY34DRAFT_106474 N 0.000
tetur23g00840 Tetranychus urticae tetur23g00840 I 0.000
BN946_scf184603.g4 Trametes cinnabarina BN946_scf184603.g4 N 0.000
M407DRAFT_17636 Tulasnella calospora M407DRAFT_17636 I 0.000
L798_14304 Zootermopsis nevadensis L798_14304 I 0.000