HMG20A (Procavia capensis)
Sox

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00505 (HMG_box) IPR000910 ENSPCAG00000013879 T328851_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
Hmg20b
M02487_2.00 		Mus musculus
NNATTATWHWN
NWDWATAATNN		 PBM
Weirauch et al.(2014)
pTH8555 		0.563 0.681
For this family, TFs with SR scores > 0.415 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSPCAP00000012952 Sox 103 171

Links

Other Sox family TFs
Other Procavia capensis TFs

166 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ANCCAN_08211 Ancylostoma caninum ANCCAN_08211 I 0.000
ACAC_0000449001 Angiostrongylus cantonensis ACAC_0000449001 I 0.000
ACOC_0001074701 Angiostrongylus costaricensis ACOC_0001074701 I 0.000
ALUE_0000980501 Ascaris lumbricoides ALUE_0000980501 I 0.000
ASU_07400 Ascaris suum ASU_07400 I 0.000
Bm3734 Brugia malayi Bm3734 I 0.000
BXY_0327500 Bursaphelenchus xylophilus BXY_0327500 I 0.000
CBG00123 Caenorhabditis briggsae CBG00123 I 0.000
odr-7 Caenorhabditis elegans WBGene00003854 D 0.000
CRE14738 Caenorhabditis remanei CRE14738 I 0.000
CGOC_0000264301 Cylicostephanus goldi CGOC_0000264301 I 0.000
DICVIV_10361 Dictyocaulus viviparus DICVIV_10361 I 0.000
nDi.2.2.2.g08322 Dirofilaria immitis nDi.2.2.2.g08322 I 0.000
HPLM_0000729201 Haemonchus placei HPLM_0000729201 I 0.000
HPBE_0000822201 Heligmosomoides bakeri HPBE_0000822201 I 0.000
Hba_12147 Heterorhabditis bacteriophora Hba_12147 I 0.000
LOAG_12992 Loa loa LOAG_12992 I 0.000
nOo.2.0.1.g08993 Onchocerca ochengi nOo.2.0.1.g08993 I 0.000
WBGene00238790 Onchocerca volvulus WBGene00238790 I 0.000
scaffold532-EXSNAP2012.4 Pristionchus exspectatus scaffold532-EXSNAP2012.4 I 0.000
L596_g18571 Steinernema carpocapsae L596_g18571 I 0.000
L893_g9511 Steinernema glaseri L893_g9511 I 0.000
L898_g1167 Steinernema monticolum L898_g1167 I 0.000
L892_g8133 Steinernema scapterisci L892_g8133 I 0.000
SPAL_0001051900 Strongyloides papillosus SPAL_0001051900 I 0.000
SSTP_0000225800 Strongyloides stercoralis SSTP_0000225800 I 0.000
SVE_1772700 Strongyloides venezuelensis SVE_1772700 I 0.000
SMUV_0000837101 Syphacia muris SMUV_0000837101 I 0.000
TCLT_0001044101 Thelazia callipaeda TCLT_0001044101 I 0.000