HBP1 (Sorex araneus)
Sox

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00505 (HMG_box) IPR000910 ENSSARG00000007731 T329089_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
Hbp1
M00194_2.00 		Mus musculus
NNNDDNNN
NNNHHNNN		 PBM
Badis et al.(2009)
Hbp1_2241 		0.368 1.000
HBP1
M11299_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$HBP1_Q2 		0.368 1.000
For this family, TFs with SR scores > 0.415 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSSARP00000007008 Sox 433 460

Links

Other Sox family TFs
Other Sorex araneus TFs

112 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
AMTR_s00002p00211460 Amborella trichopoda AMTR_s00002p00211460 N
Aquca_005_00468 Aquilegia coerulea Aquca_005_00468 N
Al_scaffold_0001_3341 Arabidopsis lyrata Al_scaffold_0001_3341 N
AT1G32700 Arabidopsis thaliana AT1G32700 N
Bostr.3359s0088 Boechera stricta Bostr.3359s0088 N
BRADI3G34160 Brachypodium distachyon BRADI3G34160 N
BRADI3G52170 Brachypodium distachyon BRADI3G52170 N
Cagra.4962s0001 Capsella grandiflora Cagra.4962s0001 N
Carubv10009979m.g Capsella rubella Carubv10009979m.g N
evm.TU.supercontig_43.104 Carica papaya evm.TU.supercontig_43.104 N
Ca_11505 Cicer arietinum Ca_11505 N
Cla001071 Citrullus lanatus Cla001071 N
Cla016461 Citrullus lanatus Cla016461 N
Ciclev10012712m.g Citrus clementina Ciclev10012712m.g N
Ciclev10032089m.g Citrus clementina Ciclev10032089m.g N
orange1.1g026096m.g Citrus sinensis orange1.1g026096m.g N
orange1.1g027730m.g Citrus sinensis orange1.1g027730m.g N
orange1.1g028583m.g Citrus sinensis orange1.1g028583m.g N
Cucsa.200310 Cucumis sativus Cucsa.200310 N
Cucsa.313040 Cucumis sativus Cucsa.313040 N
Cucsa.378840 Cucumis sativus Cucsa.378840 N
Eucgr.A01594 Eucalyptus grandis Eucgr.A01594 N
Eucgr.D02206 Eucalyptus grandis Eucgr.D02206 N
Eucgr.E00276 Eucalyptus grandis Eucgr.E00276 N
gene00954-v1.0-hybrid Fragaria vesca gene00954-v1.0-hybrid N
gene02186-v1.0-hybrid Fragaria vesca gene02186-v1.0-hybrid N
GLYMA01G02180 Glycine max GLYMA01G02180 N
GLYMA01G11390 Glycine max GLYMA01G11390 N
GLYMA01G44430 Glycine max GLYMA01G44430 N
GLYMA08G36641 Glycine max GLYMA08G36641 N
GLYMA09G33770 Glycine max GLYMA09G33770 N
GLYMA11G01100 Glycine max GLYMA11G01100 N
Gorai.003G183000 Gossypium raimondii Gorai.003G183000 N
Gorai.006G159900 Gossypium raimondii Gorai.006G159900 N
Gorai.007G032400 Gossypium raimondii Gorai.007G032400 N
Gorai.008G226100 Gossypium raimondii Gorai.008G226100 N
Gorai.013G184000 Gossypium raimondii Gorai.013G184000 N
MLOC_63157 Hordeum vulgare MLOC_63157 N
LPERR02G23300 Leersia perrieri LPERR02G23300 N
LPERR04G19240 Leersia perrieri LPERR04G19240 N
LPERR10G15280 Leersia perrieri LPERR10G15280 N
Lus10000482.g Linum usitatissimum Lus10000482.g N
Lus10014396.g Linum usitatissimum Lus10014396.g N
Lus10027735.g Linum usitatissimum Lus10027735.g N
Lus10030968.g Linum usitatissimum Lus10030968.g N
Lus10035554.g Linum usitatissimum Lus10035554.g N
Lus10040082.g Linum usitatissimum Lus10040082.g N
cassava37607.valid.m1 Manihot esculenta cassava37607.valid.m1 N
MTR_5g007230 Medicago truncatula MTR_5g007230 N
MTR_5g030130 Medicago truncatula MTR_5g030130 N
MTR_8g066820 Medicago truncatula MTR_8g066820 N
mgf006916m Mimulus guttatus mgf006916m N
mgf013167m Mimulus guttatus mgf013167m N
mgf023930m Mimulus guttatus mgf023930m N
GSMUA_Achr2G18160_001 Musa acuminata GSMUA_Achr2G18160_001 N
GSMUA_Achr5G03420_001 Musa acuminata GSMUA_Achr5G03420_001 N
GSMUA_Achr5G18120_001 Musa acuminata GSMUA_Achr5G18120_001 N
GSMUA_AchrUn_randomG07560_001 Musa acuminata GSMUA_AchrUn_randomG07560_001 N
OBART02G28660 Oryza barthii OBART02G28660 N
OB02G35810 Oryza brachyantha OB02G35810 N
OB10G26540 Oryza brachyantha OB10G26540 N
ORGLA02G0246600 Oryza glaberrima ORGLA02G0246600 N
ORGLA10G0145900 Oryza glaberrima ORGLA10G0145900 N
OGLUM02G29250 Oryza glumaepatula OGLUM02G29250 N
OGLUM10G19490 Oryza glumaepatula OGLUM10G19490 N
BGIOSGA005806 Oryza indica BGIOSGA005806 N
BGIOSGA031347 Oryza indica BGIOSGA031347 N
OLONG_011823 Oryza longistaminata OLONG_011823 N
OLONG_023395 Oryza longistaminata OLONG_023395 N
ONIVA02G31400 Oryza nivara ONIVA02G31400 N
ONIVA10G22010 Oryza nivara ONIVA10G22010 N
OPUNC02G26310 Oryza punctata OPUNC02G26310 N
OPUNC10G17840 Oryza punctata OPUNC10G17840 N
ORUFI02G30220 Oryza rufipogon ORUFI02G30220 N
ORUFI10G20640 Oryza rufipogon ORUFI10G20640 N
OS02G0692700 Oryza sativa OS02G0692700 N
OS10G0574700 Oryza sativa OS10G0574700 N
Pavir.Aa01152 Panicum virgatum Pavir.Aa01152 N
Pavir.Ab01769 Panicum virgatum Pavir.Ab01769 N
Pavir.J05501 Panicum virgatum Pavir.J05501 N
POPTR_0001s02390 Populus trichocarpa POPTR_0001s02390 N
POPTR_0001s21990 Populus trichocarpa POPTR_0001s21990 N
POPTR_0003s09160 Populus trichocarpa POPTR_0003s09160 N
POPTR_0009s00830 Populus trichocarpa POPTR_0009s00830 N
POPTR_0016s10920 Populus trichocarpa POPTR_0016s10920 N
Pm023220 Prunus mume Pm023220 N
PRUPE_ppa011266mg Prunus persica PRUPE_ppa011266mg N
30054.m000824 Ricinus communis 30054.m000824 N
SapurV1A.0151s0140 Salix purpurea SapurV1A.0151s0140 N
SapurV1A.0226s0270 Salix purpurea SapurV1A.0226s0270 N
SapurV1A.0288s0160 Salix purpurea SapurV1A.0288s0160 N
SapurV1A.0360s0060 Salix purpurea SapurV1A.0360s0060 N
SapurV1A.5427s0010 Salix purpurea SapurV1A.5427s0010 N
Si035718m.g Setaria italica Si035718m.g N
Solyc10g085800.1 Solanum lycopersicum Solyc10g085800.1 N
PGSC0003DMG400008598 Solanum tuberosum PGSC0003DMG400008598 N
Sb01g028260 Sorghum bicolor Sb01g028260 N
Sb04g031230 Sorghum bicolor Sb04g031230 N
Traes_1BL_C202F3DE1 Triticum aestivum Traes_1BL_C202F3DE1 N
Traes_6DL_CF3557CFC Triticum aestivum Traes_6DL_CF3557CFC N
TRIUR3_30366 Triticum urartu TRIUR3_30366 N
VIT_02s0012g01400 Vitis vinifera VIT_02s0012g01400 N
GRMZM2G086403 Zea mays GRMZM2G086403 N
GRMZM2G091044 Zea mays GRMZM2G091044 N
GRMZM2G093270 Zea mays GRMZM2G093270 N
GRMZM2G094168 Zea mays GRMZM2G094168 N