MTR_6g048860 (Medicago truncatula)
Sox

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00505 (HMG_box) IPR000910 MTR_6g048860 T331383_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
KEH26264 Sox 274 317

Links

Other Sox family TFs
Other Medicago truncatula TFs

29 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
CBN19486 Caenorhabditis brenneri CBN19486 N 0.480
sox-2 Caenorhabditis elegans WBGene00004949 I 0.447
Ca_14341 Cicer arietinum Ca_14341 N 0.417
EMIHUDRAFT_107556 Emiliania huxleyi EMIHUDRAFT_107556 N 0.439
EMIHUDRAFT_108701 Emiliania huxleyi EMIHUDRAFT_108701 N 0.435
Thhalv10015680m.g Eutrema salsugineum Thhalv10015680m.g N 0.417
M7I_1506 Glarea lozoyensis M7I_1506 N 0.425
GPLIN_000970900 Globodera pallida GPLIN_000970900 N 0.439
Gorai.005G106800 Gossypium raimondii Gorai.005G106800 N 0.419
HMEL002398 Heliconius melpomene HMEL002398 I 0.447
Hba_21281 Heterorhabditis bacteriophora Hba_21281 N 0.447
LCUP001586 Lucilia cuprina LCUP001586 N 0.465
MESCA012239 Megaselia scalaris MESCA012239 I 0.447
MELLADRAFT_86211 Melampsora laricipopulina MELLADRAFT_86211 N 0.480
maker-nMf.1.1.scaf02291-snap-gene-0.16 Meloidogyne floridensis maker-nMf.1.1.scaf02291-snap-gene-0.16 N 0.420
OESDEN_23252 Oesophagostomum dentatum OESDEN_23252 N 0.433
Ogr08337 Ophisaurus gracilis Ogr08337 N 0.447
PPAI003639 Phlebotomus papatasi PPAI003639 N 0.439
PPA22145 Pristionchus pacificus PPA22145 N 0.437
PXEA_0002992801 Protopolystoma xenopodis PXEA_0002992801 N 0.439
PSEUBRA_SCAF2g02551 Pseudozyma brasiliensis PSEUBRA_SCAF2g02551 N 0.418
GLOINDRAFT_31865 Rhizophagus irregularis GLOINDRAFT_31865 N 0.442
Sjc_0107520 Schistosoma japonicum Sjc_0107520 N 0.446
SMU15030186 Schmidtea mediterranea SMU15030186 N 0.441
SINV19749 Solenopsis invicta SINV19749 N 0.455
fgenesh1_pg.C_scaffold_11000031 Sporobolomyces roseus fgenesh1_pg.C_scaffold_11000031 N 0.426
SPU_021871 Strongylocentrotus purpuratus SPU_021871 N 0.435
TRAES3BF116200180CFD_g Triticum aestivum TRAES3BF116200180CFD_g N 0.423
TcIL3000.10.440 Trypanosoma congolense TcIL3000.10.440 N 0.420