Ca_19190 (Cicer arietinum)
Sox

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00505 (HMG_box) IPR000910 Ca_19190 T333602_2.00 GigaDB (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Ca_19190 Sox 2 30
Ca_19190 Sox 84 150

Links

Other Sox family TFs
Other Cicer arietinum TFs

1 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Aqu1.213820 Amphimedon queenslandica Aqu1.213820 I
ASIM_0000128901 Anisakis simplex ASIM_0000128901 I
H311_02283 Anncaliia algerae H311_02283 I
BGLB003500 Biomphalaria glabrata BGLB003500 I
BGLB000541 Biomphalaria glabrata BGLB000541 I
Aan_R014401 Calypte anna Aan_R014401 I
CORT_0B08690 Candida orthopsilosis CORT_0B08690 I
GG.C169_S01_00460 Chlorella vulgaris GG.C169_S01_00460 I
CLEC012017 Cimex lectularius CLEC012017 I
Cla016376 Citrullus lanatus Cla016376 I
Cla007529 Citrullus lanatus Cla007529 I
orange1.1g020305m.g Citrus sinensis orange1.1g020305m.g I
orange1.1g029808m.g Citrus sinensis orange1.1g029808m.g I
estExt_fgenesh1_pg.C_10228 Coccomyxa subellipsoidea C169 estExt_fgenesh1_pg.C_10228 I
CGI_10006980 Crassostrea gigas CGI_10006980 I
CMS239C Cyanidioschyzon merolae CMS239C I
CMM307C Cyanidioschyzon merolae CMM307C I
ECANG7_06547 Echinococcus canadensis ECANG7_06547 I
EmuJ_001157200 Echinococcus multilocularis EmuJ_001157200 I
ARID3B Echinops telfairi ENSETEG00000000100 I
ENSECAG00000019080 Equus caballus ENSECAG00000019080 I
GLYMA06G36940 Glycine max GLYMA06G36940 N 0.461
HelroG76486 Helobdella robusta HelroG76486 I
TTAC_0000915101 Hydatigera taeniaeformis TTAC_0000915101 I
HDID_0000342501 Hymenolepis diminuta HDID_0000342501 I
HmN_000451100 Hymenolepis microstoma HmN_000451100 I
HNAJ_0000082601 Hymenolepis nana HNAJ_0000082601 I
ISCW010349 Ixodes scapularis ISCW010349 I
ENSLACG00000006716 Latimeria chalumnae ENSLACG00000006716 I
LotgiG131492 Lottia gigantea LotgiG131492 I
ARID3B Loxodonta africana ENSLAFG00000002987 I
MDP0000198823 Malus domestica MDP0000198823 I
MESCA005201 Megaselia scalaris MESCA005201 I
augustus_masked-nMf.1.1.scaf10960-processed-gene-0.0 Meloidogyne floridensis augustus_masked-nMf.1.1.scaf10960-processed-gene-0.0 I
MhA1_Contig163.frz3.gene26 Meloidogyne hapla MhA1_Contig163.frz3.gene26 I
MCOS_0000539101 Mesocestoides corti MCOS_0000539101 I
ARID3C Myotis lucifugus ENSMLUG00000022582 I
NEMVEDRAFT_v1g42971 Nematostella vectensis NEMVEDRAFT_v1g42971 I
Ocbimv22032810m.g Octopus bimaculoides Ocbimv22032810m.g I
Ogr03071 Ophisaurus gracilis Ogr03071 I
ENSOANG00000010382 Ornithorhynchus anatinus ENSOANG00000010382 I
Contig1044.0.g66 Oxytricha trifallax Contig1044.0.g66 I
GSPATT00004674001 Paramecium tetraurelia GSPATT00004674001 D
ARID3B Procavia capensis ENSPCAG00000002708 I
nRc.2.0.1.g09267 Romanomermis culicivorax nRc.2.0.1.g09267 I
Sakowv30017861m.g Saccoglossus kowalevskii Sakowv30017861m.g I
SapurV1A.0338s0260 Salix purpurea SapurV1A.0338s0260 I
SSLN_0000405401 Schistocephalus solidus SSLN_0000405401 I
ENSSARG00000003658 Sorex araneus ENSSARG00000003658 I
SPER_0001663401 Spirometra erinaceieuropaei SPER_0001663401 I
SPU_023530 Strongylocentrotus purpuratus SPU_023530 I
ENSSSCG00000022812 Sus scrofa ENSSSCG00000022812 I
TsM_000529300 Taenia solium TsM_000529300 I
ENSTSYG00000013728 Tarsius syrichta ENSTSYG00000013728 I
TTHERM_00243900 Tetrahymena thermophila TTHERM_00243900 D
ARID3B Tupaia belangeri ENSTBEG00000007576 I
Tal_R005505 Tyto alba Tal_R005505 I
ENSVPAG00000003483 Vicugna pacos ENSVPAG00000003483 I
WUBG_12491 Wuchereria bancrofti WUBG_12491 I