Ciclev10001601m.g (Citrus clementina)
Sox

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00505 (HMG_box) IPR000910 Ciclev10001601m.g T334429_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Ciclev10001598m Sox 168 210
Ciclev10001601m Sox 168 210
Ciclev10001603m Sox 168 210

Links

Other Sox family TFs
Other Citrus clementina TFs

53 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
TGA4 Arabidopsis lyrata fgenesh2_kg.6__963__AT5G10030.1 I
TGA1 Arabidopsis lyrata Al_scaffold_0008_3070 I
TGA4 Arabidopsis thaliana AT5G10030 D
TGA1 Arabidopsis thaliana AT5G65210 D
Bostr.13175s0098 Boechera stricta Bostr.13175s0098 I
Bostr.0568s0268 Boechera stricta Bostr.0568s0268 I
Bo00615s190 Brassica oleracea Bo00615s190 I
Bo3g099410 Brassica oleracea Bo3g099410 I
Bo9g018570 Brassica oleracea Bo9g018570 I
Bra037809 Brassica rapa Bra037809 I
Bra037374 Brassica rapa Bra037374 I
Bra031871 Brassica rapa Bra031871 I
Bra024366 Brassica rapa Bra024366 I
Cagra.1085s0054 Capsella grandiflora Cagra.1085s0054 I
Carubv10001361m.g Capsella rubella Carubv10001361m.g I
Carubv10026623m.g Capsella rubella Carubv10026623m.g I
Thhalv10004438m.g Eutrema salsugineum Thhalv10004438m.g I
Thhalv10013890m.g Eutrema salsugineum Thhalv10013890m.g I