fgenesh1_pg.18_#_36 (Coccomyxa subellipsoidea C169)
Sox

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00505 (HMG_box) IPR000910 fgenesh1_pg.18_#_36 T334504_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
44434 Sox 619 670

Links

Other Sox family TFs
Other Coccomyxa subellipsoidea C169 TFs

28 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
AMAG_02504 Allomyces macrogynus AMAG_02504 I 0.418
ACAC_0000798501 Angiostrongylus cantonensis ACAC_0000798501 N 0.440
ACOC_0001190001 Angiostrongylus costaricensis ACOC_0001190001 N 0.440
BGHDH14_bgh06194 Blumeria graminis BGHDH14_bgh06194 I 0.419
fgeneshCV_pg.C_scaffold_18000199 Chlorella vulgaris fgeneshCV_pg.C_scaffold_18000199 N 0.741
EMIHUDRAFT_434306 Emiliania huxleyi EMIHUDRAFT_434306 N 0.450
gw1.30.62.1 Fragilariopsis cylindrus gw1.30.62.1 N 0.463
GGTG_05735 Gaeumannomyces graminis GGTG_05735 N 0.427
Hba_16915 Heterorhabditis bacteriophora Hba_16915 I 0.417
ENSMMUP00000031974 Macaca fascicularis ENSMMUP00000031974 I 0.422
ENSMMUG00000028932 Macaca mulatta ENSMMUG00000028932 I 0.422
ENSMEUG00000004078 Macropus eugenii ENSMEUG00000004078 N 0.416
EuGene.0000010567 Micromonas pusilla EuGene.0000010567 N 0.423
est_cluster_kg.Chr_07__66__3199198:1 Micromonas sp RCC299 est_cluster_kg.Chr_07__66__3199198:1 N 0.423
mgf001016m Mimulus guttatus mgf001016m I 0.422
fgenesh2_pg.scaffold_4000274 Monosiga brevicollis fgenesh2_pg.scaffold_4000274 N 0.438
SNAPOd2T00002710001 Oikopleura dioica SNAPOd2T00002710001 I 0.447
OFLC_0001223401 Onchocerca flexuosa OFLC_0001223401 N 0.427
gw1.20.85.1 Ostreococcus RCC809 gw1.20.85.1 N 0.436
PEQ_0000291001 Parascaris equorum PEQ_0000291001 I 0.447
PNEG_03347 Pneumocystis murina PNEG_03347 I 0.457
GLOINDRAFT_349538 Rhizophagus irregularis GLOINDRAFT_349538 N 0.431
SERLA73DRAFT_131740 Serpula lacrymans SERLA73DRAFT_131740 I 0.433
SBAD_0000070901 Soboliphyme baturini SBAD_0000070901 I 0.447
SVUK_0001721701 Strongylus vulgaris SVUK_0001721701 N 0.440
TELCIR_19210 Teladorsagia circumcincta TELCIR_19210 N 0.437
TELCIR_25179 Teladorsagia circumcincta TELCIR_25179 N 0.437
TVAG_453060 Trichomonas vaginalis TVAG_453060 N 0.416