CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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estExt_fgenesh3_kg.C_40392
(
Heterobasidion annosum
)
Sox
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00505 (HMG_box)
IPR000910
estExt_fgenesh3_kg.C_40392
T335208_2.00
Superfamily (2010-Oct-26)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
estExt_fgenesh3_kg.C_40392
Sox
116
184
PKRPASSYIFFQNEIRSQLKSKHPNMTQHELLNHISKQWSEMTPPQRDVYEKKQAAAKARYEAEKKVYE
Links
Other
Sox
family TFs
Other
Heterobasidion annosum
TFs
23 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
AGABI2DRAFT_191645
Agaricus bisporus
AGABI2DRAFT_191645
N
0.523
M378DRAFT_22958
Amanita muscaria
M378DRAFT_22958
N
0.496
BOTBODRAFT_90657
Botryobasidium botryosum
BOTBODRAFT_90657
N
0.439
CC1G_11400
Coprinopsis cinerea
CC1G_11400
N
0.443
FOMPIDRAFT_1116461
Fomitopsis pinicola
FOMPIDRAFT_1116461
N
0.466
GALMADRAFT_227586
Galerina marginata
GALMADRAFT_227586
N
0.464
M413DRAFT_292945
Hebeloma cylindrosporum
M413DRAFT_292945
N
0.432
HETIRDRAFT_439181
Heterobasidion irregulare
HETIRDRAFT_439181
N
0.741
K443DRAFT_167654
Laccaria amethystina
K443DRAFT_167654
N
0.435
PHACADRAFT_250106
Phanerochaete carnosa
PHACADRAFT_250106
N
0.500
e_gwh2.2.1019.1
Phanerochaete chrysosporium
e_gwh2.2.1019.1
N
0.496
PHLGIDRAFT_91671
Phlebiopsis gigantea
PHLGIDRAFT_91671
N
0.476
PILCRDRAFT_819051
Piloderma croceum
PILCRDRAFT_819051
N
0.431
PredSwiss_CON242.4
Pneumocystis carinii
PredSwiss_CON242.4
N
0.416
PredSwiss_EST320.1
Pneumocystis carinii
PredSwiss_EST320.1
N
0.416
PNEG_00872
Pneumocystis murina
PNEG_00872
N
0.416
PSEUBRA_SCAF25g00980
Pseudozyma brasiliensis
PSEUBRA_SCAF25g00980
N
0.434
PFL1_06779
Pseudozyma flocculosa
PFL1_06779
N
0.436
PHSY_002600
Pseudozyma hubeiensis
PHSY_002600
N
0.434
nhp6
Schizosaccharomyces pombe
SPAC57A10.09c
I
0.420
sr11268
Sporisorium reilianum
sr11268
N
0.434
UHOR_08733
Ustilago hordei
UHOR_08733
N
0.434
UM06160
Ustilago maydis
UM06160
N
0.434