CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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AARA000825
(
Anopheles arabiensis
)
Sox
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00505 (HMG_box)
IPR000910
AARA000825
T335395_2.00
Vectorbase (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
AARA000825-PA
Sox
5
47
TVAAQPVPIGKKWRSLTPQDRRPYVEEAERLRVIHMTEHPNYK
Links
Other
Sox
family TFs
Other
Anopheles arabiensis
TFs
114 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
AMTR_s00057p00119300
Amborella trichopoda
AMTR_s00057p00119300
N
0.000
AMTR_s00147p00088570
Amborella trichopoda
AMTR_s00147p00088570
N
0.000
Aquca_012_00145
Aquilegia coerulea
Aquca_012_00145
N
0.000
ETC1
Arabidopsis lyrata
Al_scaffold_0001_92
N
0.000
ETC1
Arabidopsis thaliana
AT1G01380
N
0.000
Bostr.5325s0057
Boechera stricta
Bostr.5325s0057
N
0.000
PK11198.1
Cannabis sativa
PK11198.1
N
0.000
Cagra.1968s0081
Capsella grandiflora
Cagra.1968s0081
N
0.000
Carubv10011382m.g
Capsella rubella
Carubv10011382m.g
N
0.000
evm.TU.contig_29502
Carica papaya
evm.TU.contig_29502
N
0.000
Ciclev10017220m.g
Citrus clementina
Ciclev10017220m.g
N
0.000
Eucgr.A01720
Eucalyptus grandis
Eucgr.A01720
N
0.000
Eucgr.D01323
Eucalyptus grandis
Eucgr.D01323
N
0.000
Eucgr.K00803
Eucalyptus grandis
Eucgr.K00803
N
0.000
Thhalv10009233m.g
Eutrema salsugineum
Thhalv10009233m.g
N
0.000
gene35171-v1.0-hybrid
Fragaria vesca
gene35171-v1.0-hybrid
N
0.000
gene23919-v1.0-hybrid
Fragaria vesca
gene23919-v1.0-hybrid
N
0.000
GLYMA12G32130
Glycine max
GLYMA12G32130
N
0.000
GLYMA12G10790
Glycine max
GLYMA12G10790
N
0.000
GLYMA06G45941
Glycine max
GLYMA06G45941
N
0.000
Gorai.002G083400
Gossypium raimondii
Gorai.002G083400
N
0.000
Gorai.008G172400
Gossypium raimondii
Gorai.008G172400
N
0.000
Gorai.010G252300
Gossypium raimondii
Gorai.010G252300
N
0.000
Gorai.010G253000
Gossypium raimondii
Gorai.010G253000
N
0.000
MDP0000216918
Malus domestica
MDP0000216918
N
0.000
MDP0000270078
Malus domestica
MDP0000270078
N
0.000
MDP0000387366
Malus domestica
MDP0000387366
N
0.000
cassava24285.valid.m1
Manihot esculenta
cassava24285.valid.m1
N
0.000
cassava4691.m1
Manihot esculenta
cassava4691.m1
N
0.000
cassava24286.valid.m1
Manihot esculenta
cassava24286.valid.m1
N
0.000
cassava23226.valid.m1
Manihot esculenta
cassava23226.valid.m1
N
0.000
cassava23225.valid.m1
Manihot esculenta
cassava23225.valid.m1
N
0.000
cassava10382.m1
Manihot esculenta
cassava10382.m1
N
0.000
cassava11157.m1
Manihot esculenta
cassava11157.m1
N
0.000
MTR_4g046737
Medicago truncatula
MTR_4g046737
N
0.000
mgf009009m
Mimulus guttatus
mgf009009m
N
0.000
GSMUA_Achr10G09220_001
Musa acuminata
GSMUA_Achr10G09220_001
N
0.000
PDK_20s1335581g001
Phoenix dactylifera
PDK_20s1335581g001
N
0.000
PDK_20s1307674g001
Phoenix dactylifera
PDK_20s1307674g001
N
0.000
POPTR_0002s17030
Populus trichocarpa
POPTR_0002s17030
N
0.000
POPTR_0004s02060
Populus trichocarpa
POPTR_0004s02060
N
0.000
POPTR_0007s02510
Populus trichocarpa
POPTR_0007s02510
N
0.000
POPTR_0017s06470
Populus trichocarpa
POPTR_0017s06470
N
0.000
POPTR_0015s02310
Populus trichocarpa
POPTR_0015s02310
N
0.000
POPTR_0012s01420
Populus trichocarpa
POPTR_0012s01420
N
0.000
POPTR_0011s00390
Populus trichocarpa
POPTR_0011s00390
N
0.000
Pm009748
Prunus mume
Pm009748
N
0.000
PRUPE_ppa023926mg
Prunus persica
PRUPE_ppa023926mg
N
0.000
PRUPE_ppa014728mg
Prunus persica
PRUPE_ppa014728mg
N
0.000
30169.m006531
Ricinus communis
30169.m006531
N
0.000
30086.m000210
Ricinus communis
30086.m000210
N
0.000
29842.m003644
Ricinus communis
29842.m003644
N
0.000
29842.m003592
Ricinus communis
29842.m003592
N
0.000
SapurV1A.0345s0340
Salix purpurea
SapurV1A.0345s0340
N
0.000
SapurV1A.0346s0010
Salix purpurea
SapurV1A.0346s0010
N
0.000
SapurV1A.0377s0050
Salix purpurea
SapurV1A.0377s0050
N
0.000
SapurV1A.0722s0160
Salix purpurea
SapurV1A.0722s0160
N
0.000
SapurV1A.0779s0100
Salix purpurea
SapurV1A.0779s0100
N
0.000
SapurV1A.0928s0060
Salix purpurea
SapurV1A.0928s0060
N
0.000
SapurV1A.1106s0040
Salix purpurea
SapurV1A.1106s0040
N
0.000
SapurV1A.1227s0050
Salix purpurea
SapurV1A.1227s0050
N
0.000
Solyc07g052490.2
Solanum lycopersicum
Solyc07g052490.2
N
0.000
TCM_011327
Theobroma cacao
TCM_011327
N
0.000
TCM_015351
Theobroma cacao
TCM_015351
N
0.000
TCM_030163
Theobroma cacao
TCM_030163
N
0.000
TCM_046858
Theobroma cacao
TCM_046858
N
0.000
VIT_10s0116g00500
Vitis vinifera
VIT_10s0116g00500
N
0.000
VIT_12s0059g02360
Vitis vinifera
VIT_12s0059g02360
N
0.000