ASTEI00827 (Anopheles stephensi)
Sox

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00505 (HMG_box) IPR000910 ASTEI00827 T335782_2.00 Vectorbase (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
bbx
M03975_2.00 		Drosophila melanogaster
NAACAATDNCATTGTTN
NAACAATGNHATTGTTN		 SELEX
Nitta et al.(2015)
bbx_1 		0.596 0.544
Bbx
M00196_2.00 		Mus musculus
TTCATTGA
TCAATGAA		 PBM
Badis et al.(2009)
Bbx_3753 		0.505 0.485
BBX
M05763_2.00 		Homo sapiens
TGAWCDNYGWTCA
TGAWCRNHGWTCA		 SELEX
Yin et al.(2017)
BBX_eDBD_HT-SELEX 		0.471 0.471
BBX
M05764_2.00 		Homo sapiens
TGAACDNYGTTCA
TGAACRNHGTTCA		 SELEX
Yin et al.(2017)
BBX_eDBD_Methyl-HT-SELEX 		0.471 0.471
For this family, TFs with SR scores > 0.415 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ASTEI00827-PA Sox 167 234

Links

Other Sox family TFs
Other Anopheles stephensi TFs

129 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
F775_04223 Aegilops tauschii F775_04223 I 0.000
LPERR01G04800 Leersia perrieri LPERR01G04800 N 0.000
LPERR02G04250 Leersia perrieri LPERR02G04250 N 0.000
GSMUA_Achr5G26530_001 Musa acuminata GSMUA_Achr5G26530_001 I 0.000
OBART02G04930 Oryza barthii OBART02G04930 N 0.000
ORGLA02G0045500 Oryza glaberrima ORGLA02G0045500 N 0.000
OGLUM02G04740 Oryza glumaepatula OGLUM02G04740 N 0.000
BGIOSGA007600 Oryza indica BGIOSGA007600 N 0.000
ONIVA02G05120 Oryza nivara ONIVA02G05120 N 0.000
OPUNC02G04080 Oryza punctata OPUNC02G04080 N 0.000
ORUFI02G05030 Oryza rufipogon ORUFI02G05030 N 0.000
Pavir.Ba03370 Panicum virgatum Pavir.Ba03370 N 0.000
Pavir.Bb00804 Panicum virgatum Pavir.Bb00804 N 0.000
Pavir.Fb00782 Panicum virgatum Pavir.Fb00782 I 0.000
Pavir.J00788 Panicum virgatum Pavir.J00788 I 0.000
Pavir.J11717 Panicum virgatum Pavir.J11717 I 0.000
Si019951m.g Setaria italica Si019951m.g I 0.000
Sb09g029120 Sorghum bicolor Sb09g029120 I 0.000
TRAES3BF106100060CFD_g Triticum aestivum TRAES3BF106100060CFD_g I 0.000
Traes_7BS_4D5DE99CC Triticum aestivum Traes_7BS_4D5DE99CC I 0.000
GRMZM5G891280 Zea mays GRMZM5G891280 I 0.000
AC234185.1_FG006 Zea mays AC234185.1_FG006 I 0.000