CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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NECAME_11932
(
Necator americanus
)
Sox
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00505 (HMG_box)
IPR000910
NECAME_11932
T336695_2.00
WormBase:ParaSite (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
NECAME_11932
Sox
8
65
IFVKEHFAKHSPKNLSEGKETMKEAAAAWKSLDVVQRKKYEELAKQYRADKMHEFDAL
NECAME_11932
Sox
103
172
PERAPSAYNLFVQEQFNQLKKKGDVVTPVVNTMQRISAEWKAMSESAKEPYIAKASKMAERYKTELELWK
Links
Other
Sox
family TFs
Other
Necator americanus
TFs
11 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Aquca_009_00913
Aquilegia coerulea
Aquca_009_00913
N
evm.TU.supercontig_1.434
Carica papaya
evm.TU.supercontig_1.434
N
gene26335-v1.0-hybrid
Fragaria vesca
gene26335-v1.0-hybrid
N
GLYMA11G34201
Glycine max
GLYMA11G34201
N
GLYMA18G04105
Glycine max
GLYMA18G04105
N
Gorai.001G093000
Gossypium raimondii
Gorai.001G093000
N
Lus10000517.g
Linum usitatissimum
Lus10000517.g
N
MDP0000217734
Malus domestica
MDP0000217734
N
MDP0000276134
Malus domestica
MDP0000276134
N
30143.m001167
Ricinus communis
30143.m001167
N
TCM_002022
Theobroma cacao
TCM_002022
N
TCM_042727
Theobroma cacao
TCM_042727
N