CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
nLs.2.1.2.g01322
(
Litomosoides sigmodontis
)
Sox
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00505 (HMG_box)
IPR000910
nLs.2.1.2.g01322
T336704_2.00
WormBase:ParaSite (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
nLs.2.1.2.t01322-RA
Sox
27
97
PKRPHTAYVHFVNARRKELTNSDSHETLHQRSFLADVAKQWKALSDDQKKFYFDKSAKEHSDYQKAMEEYR
Links
Other
Sox
family TFs
Other
Litomosoides sigmodontis
TFs
8 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
CMQ_3201
Grosmannia clavigera
CMQ_3201
N
0.000
TTRE_0000577501
Trichuris trichiura
TTRE_0000577501
N
0.000
UV8b_5805
Ustilaginoidea virens
UV8b_5805
N
0.000